| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5315 |
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| Symbol | |
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| ID | 8361492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6786556 |
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| End bp | 6789675 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967463 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003124947 |
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| Protein GI | 256424294 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0672223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.942477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG TTCTCTTGCT CATCACCTGG CTTTCAGGGA TGGCACCTGT AACGTTATAC
GCACAACAAA CCGTCTCAGA CCCTGTAATT AATTCTACAC TCACTGGCAC TGTCATAGAC
AGCAAAACAC AGACGCCGAT CATCGGCGCA TTGGTACGCA TTAAAGGTAC CACCAACCAG
GTATTAACTG ATGCGAAGGG AAACTTCTCT TTTAAAACGG GACAGAAACT GCCATATATT
CTCGAAGCAG CTTTCATTGG GTATAAAAAA CAGGAGATCA AAGCAGAAAA GTCTCCTTTG
CAGATCATAT TACAGGAAAC GGAGAGTCAG TTGAACGAGG TGGTAGTAGT AGGATATGGT
ACACAACGTA AAAGTGATAT CACCGGTTCT GTAGCCAGTG TATCTAAAGT ATTACTGGCG
CAACCTGCTG CCGCATTTGA TAATCTGTTA CAGGGAAGCG TACCTGGTGT GGCGGTTACA
CAAAGTTCGG GACAACCGGG AAGTACGGCA ACCATCCGTA TCAGGGGAGG AAATTCTATC
AGTTTCGGGA ATGCTCCTTT ATATGTTATC GACGGATTTA TTATCTACAA TAATAATGAT
TACGCTAATA CAGGCGCATC CAATGGTACA GGGGTCAACG CATTATCCAC TATCAATCCA
AGTGATATCG CTTCTGTGGA AGTATTGAAA GATGCTTCTG CCACAGCCAT CTACGGATCA
CGTGGCGCTA ACGGTGTTAT CATCATCACC ACAAAAAGAG GTCGTAGAGG ACATGATGAA
ATCAGCTATA ATACCTACGT CGGCACACAA CAGGTAAGAA AGAAACTGGA TCTGCTTAAC
GCTACACAAT GGGGGGAGCT GATCAATGAT ATCAATGTCA GTACAAACAG TCCTAAAACA
TATACTGCGG AACAGCTGGC AGCATTAGGG GAAGGCTCCG ACTGGCAGTC CGCTGCATTG
CGGAAGAAAG CATTGCAGAA CCACGAACTG TCTTTCTCCG GTGGTGACGA GAAGTCAAGA
TACCTTATCT CCGCCAACTA CTTTGATCAG GGTGGTATTA TCGTTAATAC CGGTTTTAAA
CGTTACTCCG GACGTGTCAA TTATGAGCGT TCTGTAGGTG ATAAACTGAA GATTGCTACC
AATATTTTTG GTAGTCAGTC GATAGAAGAT AAACTATATG GTAATGGCTA CAATAGCCTG
AATTTCCAGA GTACCGCTTT TGCCAATCTG TTACAGGTAT CGCCGGTGGC AAAGATCTGG
AATGAAGACG GGACTTATAA TACCAGCAGT CCTTATTCGG CAAATCCGAC CAACCCGATA
CAGGATTTTC AATCTACCAT CAACAAAACT TATCTGAGAA GGATACTGGC GAATACTTCA
CTGGAATACA AGCTATTCAG GGAACTCACC CTGAAAGTAA CGGGCGGCGC AGATCTGATC
AATACAAAAC AAAACTATTA TTCTCCCAGT TATGCGGGTT CCCCCGGGGG AAGTGCCAGT
GGTTATGCAG CAGGTGGTTA TGCCGCTGTA GGTAATCTGA GTGCGACCAC CTGGATCAAT
GAGAACACGC TGACCTACGA CCATTCAATC AATGAGGAAC ATTTTCTGAA CATACTGGCC
GGTTACACCA TGCAACACCA GATGGATGAA TCGGCAGTGG CCAGTGCCCA GAAATTTCCG
AATGATCTGA CATCATTCAA TAACCTGAAC TTCGCCAGTA CACCTGTATT GTCAGTGTCT
GATGGACATG AGTCTGCCCT GAATTCCTAT CTCGCAAGGG TGAATTATTC CTATCAGCAT
AAATATAATG TAACCGTTTC GCTTCGTTCG GACGGTTCTT CCAGGCTGGG AAGAAACAAT
CGCTGGGGGT ACTTTCCCTC CATTGGATTC TCATGGAATG CCAGCAAAGA AACATTCGCC
CAACGCTGGG AACCGACACT TAGTGACCTG AAAGTAAGAC TTTCTGCAGG TCGGACAGGT
AACTCGGAAG TACCGCCTTA TAGTTCGCTG GCGGCCTTAT CACCTACCAA CTATTATTTC
AATGGCGCAT TGGTTACAGG TATCGCACCA GTACAGATAG AGAACCCGGA TCTGAAATGG
GAGACGACTA CGCAGTATAA CGCCGGACTG GATTTCGGTA TTCTGCATAA AAGGGTGAAT
GTCTCGGTGG ATGCTTATTA CAAAAAGACG ACTGACCTTT TACTGAATGT ACCATTTGCC
CTGTATACCG GTTATGCCAG CGTATTACAG AATGTGGGCA GCGTAGAGAA CAAAGGGATT
GAACTGAGCA TTACTTCAGA TAATATTAAA ACTGCAGACT TCAGCTGGAA ATCTACCCTC
GTACTGGGCG CTAACAGGAA CAAGGTATTA GGATTGGGAG ACGGTACGGA CTACTATTTT
CCTTTAGCAC CCACAGGCTA TGTCTCTCCG GTGATTGTGA AAGTCGGTTT ACCCGTAGGT
AGTTTCTGGG GCTACAATAC AAATGGTCTG ATCACGAAGG AAGACCTGGT AAAGGGTATT
CCGGTATTAT CCGGCGTATC GCAACAGGCA GGGGATACCA GGTATGTTGA TACGAATAGC
GATGGTGTAA TCAGTACGGC AGATAAACAT GATCTTGGCA GCGCGCAGCC TAAGCTGACT
TTCGGCCTGA CCAATACATT GAACTATAAG GCCTTTGATC TCTCGTTTGT ATTCCAGGGA
AGCCATGGTA ATAAGATCTT CAACTTCCTG CAACAGAAAC TGGAAATCCC GACATTATCA
CTGAATGCAT CTGCAACCTT GCTGGACAGG TACAGTGAAA GTAATCCGAA CGGTAAAGTG
GCCCGTGCAA CCAATGCACC GGTGGCACAG GTAACAGACC GCTATATAGA AGACGGCTCC
TTTGTAAAAC TGAAAAACCT GTCGCTCGGA TATAATCTGC CTAAATCGGT ACTGGAAAGG
ATCCATGTCA ACCAGTTACG CATTTATGTC ACTGCACAGA ATATCCTGAC CTGGACCAAC
TACACAGGGC TGGATCCGGA GGTGAACTTC TTTGATAGCG ACAATACCAA GCAGGGTATT
GATTATGGCG CCTATCCTGC TTCGAAAAGT TATCTCGTCG GATTGGGTGT AACCTTCTGA
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| Protein sequence | MKKVLLLITW LSGMAPVTLY AQQTVSDPVI NSTLTGTVID SKTQTPIIGA LVRIKGTTNQ
VLTDAKGNFS FKTGQKLPYI LEAAFIGYKK QEIKAEKSPL QIILQETESQ LNEVVVVGYG
TQRKSDITGS VASVSKVLLA QPAAAFDNLL QGSVPGVAVT QSSGQPGSTA TIRIRGGNSI
SFGNAPLYVI DGFIIYNNND YANTGASNGT GVNALSTINP SDIASVEVLK DASATAIYGS
RGANGVIIIT TKRGRRGHDE ISYNTYVGTQ QVRKKLDLLN ATQWGELIND INVSTNSPKT
YTAEQLAALG EGSDWQSAAL RKKALQNHEL SFSGGDEKSR YLISANYFDQ GGIIVNTGFK
RYSGRVNYER SVGDKLKIAT NIFGSQSIED KLYGNGYNSL NFQSTAFANL LQVSPVAKIW
NEDGTYNTSS PYSANPTNPI QDFQSTINKT YLRRILANTS LEYKLFRELT LKVTGGADLI
NTKQNYYSPS YAGSPGGSAS GYAAGGYAAV GNLSATTWIN ENTLTYDHSI NEEHFLNILA
GYTMQHQMDE SAVASAQKFP NDLTSFNNLN FASTPVLSVS DGHESALNSY LARVNYSYQH
KYNVTVSLRS DGSSRLGRNN RWGYFPSIGF SWNASKETFA QRWEPTLSDL KVRLSAGRTG
NSEVPPYSSL AALSPTNYYF NGALVTGIAP VQIENPDLKW ETTTQYNAGL DFGILHKRVN
VSVDAYYKKT TDLLLNVPFA LYTGYASVLQ NVGSVENKGI ELSITSDNIK TADFSWKSTL
VLGANRNKVL GLGDGTDYYF PLAPTGYVSP VIVKVGLPVG SFWGYNTNGL ITKEDLVKGI
PVLSGVSQQA GDTRYVDTNS DGVISTADKH DLGSAQPKLT FGLTNTLNYK AFDLSFVFQG
SHGNKIFNFL QQKLEIPTLS LNASATLLDR YSESNPNGKV ARATNAPVAQ VTDRYIEDGS
FVKLKNLSLG YNLPKSVLER IHVNQLRIYV TAQNILTWTN YTGLDPEVNF FDSDNTKQGI
DYGAYPASKS YLVGLGVTF
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