| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5283 |
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| Symbol | |
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| ID | 8361460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6698845 |
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| End bp | 6699639 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967431 |
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| Product | protein of unknown function DUF140 |
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| Protein accession | YP_003124915 |
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| Protein GI | 256424262 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.125379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCAA ATATCGAACA GCCGGAGAAA CCACTCATAT CGAAAGGTAT TGATGGGTTT
TTTAAAGACA TCTTTAACAT CGTTTTATTC ATCGGCAGAA TCTTTAAGGA AGCCTTTAAG
CGACCTGTTG AAATACGCGA GGTTATCCGT CAGTGTTACC AGGTTGGCTA TAAGTCTCTG
GCGCTGATCA CTATGACCGG CTTCATTACC GGTCTCGTAT TTACGAAACA ATCCAGACCT
TCCCTGTCCG AATTTGGTGC TACTTCCTGG TTACCTTCCC TGATCGCTAT TGCTGTCATC
AGGGCACTGG CGCCATTGGT AACGGCCCTG ATCTGTGCCG GTAAGGTAGG TTCCAGTATT
GGTGCGGAAC TGGCATCCAT GCGTGTAACC GAACAGATAG ACGCGATGGA AGTATCTGCG
ATTAACCCGT TCAAGTTTCT GGTTACGACC AGGGTCATGG CGACGACCAT ATCCATTCCC
ATCCTCGTCG GTTATACCGG ACTGGTAGGT TTACTGGGGT CTTTCCTGGA TATTCACCTG
AACGAGCAGA CTTCTTTTAC CAGTTTTTTC CAGGAGGCAT TCAAGAATAT ATATTTCCTT
GATTTTATCA CAACGGGCGT GAAGGCGGTT GTTTTCGGCT TTACGATCGG AGTGGTAAGC
TGTTATCAGG GATACCATGC TACCCAGGGT ACACAGGGTG TAGGTAAAGC AGCGAACATT
TCGGTGGTTA TCTCCATGTT CCTGATATTT ATTGAAGAGA TCTTTATTGT TCAAATTGCC
AATTCTATCC GATAA
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| Protein sequence | MDSNIEQPEK PLISKGIDGF FKDIFNIVLF IGRIFKEAFK RPVEIREVIR QCYQVGYKSL
ALITMTGFIT GLVFTKQSRP SLSEFGATSW LPSLIAIAVI RALAPLVTAL ICAGKVGSSI
GAELASMRVT EQIDAMEVSA INPFKFLVTT RVMATTISIP ILVGYTGLVG LLGSFLDIHL
NEQTSFTSFF QEAFKNIYFL DFITTGVKAV VFGFTIGVVS CYQGYHATQG TQGVGKAANI
SVVISMFLIF IEEIFIVQIA NSIR
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