| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5281 |
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| Symbol | |
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| ID | 8361458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6697044 |
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| End bp | 6698066 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967429 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003124913 |
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| Protein GI | 256424260 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.192594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAA CAAGCAACAG ACGCGCGGTA ATAGTAGGCA TTTTTATCAC TCTAGGTTTG
CTTATTGTTA TAGCAGGCGT ACTTACACTT GGAGGACAAA AAAAGGCTTT TGTAAGCGCG
ATACATGTCA GTGCTACCTT CAGTGATATC GGAGGGGTGC AGACCGGTAA CAACATCTGG
TATTCAGGTG TAAAGGTAGG TACCGTAAAA AAGATCACGT TTATAGAGCA TAATAAGATC
AGGGTTGATC TGAACATTGA AGAGAAATCA GCACAGTTCA TACATAAAGA CGTATTGGCG
AAGGTAGGTT CTGATGGTCT GGTAGGTAAT AAGATCATTG CTTTATCCGG TGGTTCTGAG
AACGTTCCGG CTATCCAGGA TGGCGATCAG CTGAAGGTAG CGGTGAACAT CAGCCCTGAT
GAAATCATGA CTACCCTCCA GGAGAATAAC AAGAAGCTCC TGCTGATCAC CGGCGATCTG
AGCACACTCA GCAAACGCAT AGTTAACGGA GAAGGCTCTG TTGGTAAGTT AATGACCGAT
GAGTCCCTTT ATAATAATCT GTCGCAGACA GTCGCCACGT TTGAAAAAGC AGCGGCTAAT
ACGGAACGCC TTACCCAGGG GCTGGCGGAC TATGCATCCA GTCTACGTAA GAAAGGTTCA
CTGACCAATG ATCTGGTAAC GGATACTACT GTATTCAACA ATCTCCGTGC TGCTGTAGCC
CAGATGAAAG ACGTGGCAGG TAATGCGAAT GTAGTGGTGG AAAATTTGAA GAGTACAACA
CGTAGTCTTA ATGACAACCT GAATGATGCG AAGTCGCCGG TCGGAGTGTT GCTGAATGAT
CAGCAGTCAG GGGAAGACCT GAGACAAACA CTCAGGAACC TGAATGTAAG TACTGCGAAA
CTAGACGAGG ACCTGGAAGC GGCGCAGCAC AATTTCCTGC TGAGAGGATT CTTTAAGAAG
AAAGCAAAGA GAGAAGAGAA GGCGAGGAAA GATAGTATCA AGAATGCGCA GAAGCAGCAG
TAG
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| Protein sequence | MKETSNRRAV IVGIFITLGL LIVIAGVLTL GGQKKAFVSA IHVSATFSDI GGVQTGNNIW
YSGVKVGTVK KITFIEHNKI RVDLNIEEKS AQFIHKDVLA KVGSDGLVGN KIIALSGGSE
NVPAIQDGDQ LKVAVNISPD EIMTTLQENN KKLLLITGDL STLSKRIVNG EGSVGKLMTD
ESLYNNLSQT VATFEKAAAN TERLTQGLAD YASSLRKKGS LTNDLVTDTT VFNNLRAAVA
QMKDVAGNAN VVVENLKSTT RSLNDNLNDA KSPVGVLLND QQSGEDLRQT LRNLNVSTAK
LDEDLEAAQH NFLLRGFFKK KAKREEKARK DSIKNAQKQQ
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