| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5271 |
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| Symbol | |
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| ID | 8361448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6675671 |
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| End bp | 6676525 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967419 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003124903 |
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| Protein GI | 256424250 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0620952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0372935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA TCTGTTCATC TTCCAATGAA ACGTTGCTCG GACTCGATAC CGGAGAAGAC
TGCCTGGCGA AGCCGGTACA GTATGCTGAA TACACGATCG TATTTGTGGA AGAAGGCGCT
GGTATCTTTC ATGCAGATTT TGGCGCATTC CCTTTTAAGG GGCCTGTATT GTTGTTCTCT
ACGCCTTTGC AGATGATCTA TATTGAGCAG TCTGCGCCCA GTAAACTGGC CATGTTGCAA
TTTCATAGTG ATTTCTATTG TATAGAATAC CACAAGGCAC AGGTGGCCTG CAATGGCCTG
TTGTTTAATA ATATTTATAT AGAGCCTTCG GTAAAACTGA ATGACCGGGA GGCGCGTATT
TTCAAAAACC TGCTGGATGA ACTGGCAGAA GAGTTTGACG TCAGCGGTTG TGATGAAATC
GTGATGCGGG GCTACCTGCA GCTGTTTCTT GCCAAGTCCA GTAGTATAAA GACGCGGTCT
GCCGCCAATT TGCCGGACCC TGAGGAGCGC GATGAACAAA TGGAGGCATT CAGGCGCTTA
CTGGACCAGC ACTACCTGAC CTTACACAAG CCGGCTGACT ATGCGGAACT GCTGGCCATG
TCGCCCAACA ACTTTACCAA ACGTTGTACG AAATACTTTA AAAAGTCGCC TTCTGCTATG
ATACAGGAAC GCCTGATACT GGAGGCAAAG CGGCAACTGC ACCTGACCCG GCGCAGTATC
AAGGAGATCG CTTATTCGCT GCAATTCAGT GATGAATTCT ATTTCAGCCG CTTTTTTAAG
AAGTTTACCA AGGTTTCTCC GCAATCCTTC CGGCAGCAAA CCGGCATTTC CATCGTAGCT
GATCTTCCCC GGTAA
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| Protein sequence | MKRICSSSNE TLLGLDTGED CLAKPVQYAE YTIVFVEEGA GIFHADFGAF PFKGPVLLFS
TPLQMIYIEQ SAPSKLAMLQ FHSDFYCIEY HKAQVACNGL LFNNIYIEPS VKLNDREARI
FKNLLDELAE EFDVSGCDEI VMRGYLQLFL AKSSSIKTRS AANLPDPEER DEQMEAFRRL
LDQHYLTLHK PADYAELLAM SPNNFTKRCT KYFKKSPSAM IQERLILEAK RQLHLTRRSI
KEIAYSLQFS DEFYFSRFFK KFTKVSPQSF RQQTGISIVA DLPR
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