| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5231 |
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| Symbol | |
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| ID | 8361408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6609934 |
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| End bp | 6611490 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967379 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003124863 |
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| Protein GI | 256424210 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0707794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0138184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATGG GTCCCTTTGT CATTAATATT TGTGCCGGTG ACGGAATTGC CTTTCTTTTA
CCAGTCAGAT ATATGGATGT AACAAAGGAA AAAGAAGGAT TTATCGTATC TAAGCTCGAT
GTATGGCTGT TTACAGGTAT GCTGATCTGG GTCAGTCTAC TTGCCGCAAC GCCTGTGAGC
TGGCTGGTGT TTGTCCGGCA GCTGCTCGCG CTGGCTTTAC CACAATTACC GGTTTTTGTG
TTTGCCTGGT ACCGGACTTA CCTGCGCGAA AGATGGTCCC TGCAGCAATA CCTGTTCTCC
TGGGCAGGTG TTTTTGTGGT TGGTCTGCCA CTGCTGACTG CCAGCTGTAT GTACATGCAG
GTATTGGGTG TATCAGATCA GCTGTTCGCC ATCGGCGCGC TCTATTGTAT TTCACTGGAA
TTGGTACTGG TTGTCAATGC CTGGTATCGC CGGCAGGTAA GGCAGGTACC CTGGATCGGG
CGTATCAGCC TGGATAAGGC GGTGTTGATC AGTCTTCTGA TGATTGCCGT TATTCTTTCC
GCGATGGCCG TATCCAGTCT TAATAACCCG CAGTATCACA CCAAAGACCA ATTGCTGATC
GGTTATGAAT TTATACCGGC TAAGATCATT GCGCATTTTG GTCTTTTCCT GTTTTTTATC
GCACAGTTTC TTTTCATGTA TATGTGCGGG TATGCGCTGT ATTACCTGAA TAGCAGATGG
CTGGTCGCCC GTGTGTTGAA GCAGCGGGGA ATCATGGCTT ATGTCATGAG TGCTTTTGCG
CTTATTGCGA TCTTATACCC TTTGATGGGG CAGCTCTTGG CCTGGATGCC GATCAATCGT
TTATTAGGGA GTATCTTTTC GGAGAATCCC TTTGTATTGG AAAATGCATT TGCTGCGCTG
ATGATCGTCT TTGCGACACT ACCGGTGGTA CTCGCTATTC AGTGGACCAG GCAAAACAAC
CGGATCGTGT CATTGGAGCA GGAGAAGACC AGGACTGAAC TGGATCTTTT AAAGCAGCAG
CTGAACCCTC ATTTCTTTTT CAATACCTTG AATAACCTGT ATGCGTTGAG TCTGCAACAG
TCGAAACAAA CGCCGGACAG TATTCTGCAA TTGTCGGAAC TCATGCGTTA TGTCATTTAC
AAGGGACAGG AAACAAGGGT GAGTATCCGG GAAGAAGTAA AATACCTGGA AGACTACATG
GATCTTCAAC AGATCCGTTT AAGGAAATCA CTGGACCTGC AATTTCAGCC TGATATAGAA
GACCCTGCAC AACAGATCGC GCCGATGCTG CTGATCGTAT TTATAGAGAA TGCTTTCAAA
CATGGGATAG AACCCGCAGA AGATGCTGCC TTCCTGCATC TTACATTGCA TTGTAAACAA
CAACGTTTGT ATTTCAGTTG TGAGAATTCC TTTGAGGGAG ATGTAGCTAC TGCCGGCGGT
ATCGGATTGA GCAATCTGCA AAAGCGGCTG GAATTGTTAT ACCCGGGGCG TTATCAGTTA
CAAACCGGCG TAAAAAATCA TACATTTAAA GCAGAAATGC AACTGGATCT TTCATGA
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| Protein sequence | MKMGPFVINI CAGDGIAFLL PVRYMDVTKE KEGFIVSKLD VWLFTGMLIW VSLLAATPVS
WLVFVRQLLA LALPQLPVFV FAWYRTYLRE RWSLQQYLFS WAGVFVVGLP LLTASCMYMQ
VLGVSDQLFA IGALYCISLE LVLVVNAWYR RQVRQVPWIG RISLDKAVLI SLLMIAVILS
AMAVSSLNNP QYHTKDQLLI GYEFIPAKII AHFGLFLFFI AQFLFMYMCG YALYYLNSRW
LVARVLKQRG IMAYVMSAFA LIAILYPLMG QLLAWMPINR LLGSIFSENP FVLENAFAAL
MIVFATLPVV LAIQWTRQNN RIVSLEQEKT RTELDLLKQQ LNPHFFFNTL NNLYALSLQQ
SKQTPDSILQ LSELMRYVIY KGQETRVSIR EEVKYLEDYM DLQQIRLRKS LDLQFQPDIE
DPAQQIAPML LIVFIENAFK HGIEPAEDAA FLHLTLHCKQ QRLYFSCENS FEGDVATAGG
IGLSNLQKRL ELLYPGRYQL QTGVKNHTFK AEMQLDLS
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