Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5225 |
Symbol | |
ID | 8361402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6604624 |
End bp | 6605700 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644967373 |
Product | peptidase M48 Ste24p |
Protein accession | YP_003124857 |
Protein GI | 256424204 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.32225 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTAAAG GAACCTTTTA CGATCACAAG GTGGCTGTTG CCATTCCTGC TACGATCCGG ATATTCGATG AAAGTTTGCA GTTTGAAACA CCGGTGGAGG GTATGCCTCC GCGCAGGCAT CACTGGTTAT TTTCAGAGAT AAACGTCGAT ATGGCTGACA AGCGTTTTAT CCGTCTTGTC AACCAGGCCG ATGATGCCGG TACACTGGAA GTAAATGACG CCGCTTTCGT AGATATGTTC CTGGAAAAAT ACAAACGCGT ACGCAGTATC GGTCTGGATA GACTGGTACT GCGTAATGGC GTTAAAGTGG GGCTGGCTGC CCTGCTGATC ATTCTCGGTC TGGCGGCACT GGCGCATTTT GTAATTCTTC CCTGGTGTGC CGACAGGATC GTCGATCGCT TGCCCCGTTC CTTTGATAAA GAATTAGGAG AAACGGCCAT GCAGAGCATG GATGAAAGCC GCGACGTAAA TGCCAGTGCC TTACTCACCA GGTTTGGCGC GCAGATGCAC TGGGATTCCC CCGACTCCCT GAAATTTTTT ATAGTACCCA GTAAGATCGA AAATGCGTAT GCGCTTCCCG GCGGCTACGT ATTTGTTTAT ACGGGTCTGC TGAAGAAACT GAATAAAAAA GAAGAACTGG CCGCATTATT GTCACATGAA GTGGCACACG TCAGCTGCCG TCACTCCGTA CGTAAGTTGT GCCGGGATAT GAGTTCTTCT GTACTGTTAA CCCTCGTGCT GACAAACAGC AGTCAGGCTG CCAGCGTTTT TTATTCCAAC GCCAACGCGC TTTATAACCT CACTTATTCC CGCCAGTATG AACAGCAGGC GGATATTGTC GGCATGGAAA CCCTCCGTAA GAATCATATC GATCAGCATG GCATGGTAGA ACTGATGCAG GTGCTGCAAC AATTGAGTGA AAAGGTGGAT GTGCCTGAGT TTATCAGCAC ACACCCGCTG ACCAAAAACA GGATCAGTTA CGCGAAGGAA AACATCAGAA AGCATCCCGG AACGGTAGAT CCGCATGAAC AGATGGACGT GATTTTTGGT CAGTTAAAAG CATTGTACAA AAAGTAA
|
Protein sequence | MFKGTFYDHK VAVAIPATIR IFDESLQFET PVEGMPPRRH HWLFSEINVD MADKRFIRLV NQADDAGTLE VNDAAFVDMF LEKYKRVRSI GLDRLVLRNG VKVGLAALLI ILGLAALAHF VILPWCADRI VDRLPRSFDK ELGETAMQSM DESRDVNASA LLTRFGAQMH WDSPDSLKFF IVPSKIENAY ALPGGYVFVY TGLLKKLNKK EELAALLSHE VAHVSCRHSV RKLCRDMSSS VLLTLVLTNS SQAASVFYSN ANALYNLTYS RQYEQQADIV GMETLRKNHI DQHGMVELMQ VLQQLSEKVD VPEFISTHPL TKNRISYAKE NIRKHPGTVD PHEQMDVIFG QLKALYKK
|
| |