| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5223 |
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| Symbol | |
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| ID | 8361400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6599071 |
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| End bp | 6602757 |
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| Gene Length | 3687 bp |
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| Protein Length | 1228 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644967371 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124855 |
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| Protein GI | 256424202 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.774723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTGGTAC TGGATCTTTC TCCGCCACCT ACAGTAGCCG CCGGTCCTGC TACTTATTGT
CAGAACGATC CTGCTACACA ATTGACAGCA ACAGGAACCA ATCTTCTCTG GTATAATTTG
GCGACAGGTG GTACCGGTTC TACGACCGCA CCTACACCGT CCACCAACAG ACCCGGTACC
TTTACCTACT ACGTTACACA GACACTGCCC AATCGTTGCG AAAGTCCGAG GGCAGTAATC
ACCGTCATCG TCAATGCAAG ACCGCCAGCA CCTGCTGTCA ATTCTCCCCT TGGGTTGTGC
CGTAATCAGG CGGCCACACC ATTAACAGCT TCCGGTAGTG GTCTCTTATG GTACACCAGT
GCGACCGGTG GTACGGGAAC AGCTACAGCG CCTACTCCTG TAACCACGAC AGCCGGTACG
ACAACCTGGT ATGTCAGTCA GACCACCAAT GGCTGTGAAG GTCCCAGGGC TGCGATTGAA
GTGATTGTCA GCGAACTGGC AGGCGCTCCA ACGGTCAGCT CTCCGGTCAA TTATTGCCGG
AGCCAGTCTG CAACGCCGCT TAGCGCCGGA GGTAGCAATC TGCGATGGTA TACTGCCGCT
ACAGGAGGTA CGGGTTCACC TACAGCGCCG GTTCCTTCTA CCGCCACACC AGGCAGCACC
ACTTATTATG TGAGCCAGAT GACAGGTTGT GGGGAGAGTC CGCGGGCCGC TATTGTGGTA
AATGTTACAG CCAGTCCTTC GGCCAGTATT GCGTATAGTC CGGCGATACT CTGTAATGCA
CCCAATACAC CTGCTACGCC GAATCCCGTT GTACACGTAA CACACACAGG CGCTGGTGGT
GGTCGCTTTT CTGCAGTACC TGGCGTGGGC CTGACGATAG ATGCAGCCAA TGGCGATATT
ACACCTGCAG GAGCAAATCC GGGTACTTAC ACGATAAGAT ACACTATTAC CGGTACGGCT
CCCTGTCCTG ACTATGTAAC TACCACAACC GTCACTGTCA ATAGTACGCC TGCTGCCACG
ATCGCCTATC CGGCGATCTG TTCATCTGAC GGCGTGACCA GTGTACAAAT AACCGGCGCC
AATGGGGGTA GTTTCTCTTC CACTACAGGG TTAAGTCTGA ATACCTCTAC AGGGGCCATT
ACACCGGGAA CCAGCACACC TGGTACCTAT ACTGTCACCT ACACCATACC TCCGTCTCCA
CCTTGTGCAG GTTTCAGTAC CAACACACAG GTAACGATCA CGAGAGCACC TGTTGCCACG
ATCAGCTATC AGCCGGCGGT ACTCTGTAAT GTAACAGGTG GTACGCCTAA TCCACCAGTT
ACACCATTGG TCACCGGTAA TACCGGCGGT ACATTCACTA TCACACCAGC CAACGGTTTA
AATATCAATC CGGCTACCGG TACAATTACC CCTGCGGGGG CTACCCCTGG TGTCTATACC
ATCAGCTATG CGATTACAGG AACAGGTGGT TGTGCGCTTT TCAGTACCTC CGCTACGGTA
ACTGTCAACA GTACGCCTAC CGCTACTATC CGTTACGCCG GCTCGCCTTA TTGCGGAAGC
ACCAATACGC CACAGACCGT TACCTTCTCT GGAACATCGG GAGGTACGTT CAGTGCAGGT
ACAGGATTAA GCATCAATCC TGCCACAGGG ACAATAGATC CTTCCCAGAG CACACCCGGG
ACTTACACCG TTCAATATGC GATCGCCGCA GCGCCGCCAT GTCCAGGATA TAGTACCACC
GCCAGTGTCA GTATTACGGA GCAACCAGTG ATCTCTTTCC CTGTCACCAC ACAGGCGATT
TGTGCTGGTG GTTCAGCCAC CTTCAGACCA GGATCAACGG TACCGAATAC GACGTATAAC
TGGTCCGTTG TGGGAGCTTT ACCGGCAGGT GTAGCAGGTA TCAGTGCGGG TTCAGTCAAT
GGAGCGAATG CCGCTATCAA TTTATCATAT ACCAATACAG GTAATGTCAG TCAGACGCTC
ACCATACGCG TTACACCGGT CAATCCGACA CCATCACCGT GTACCGGTGC GGTCTATGAT
CTGCAGCTGA CAGTCAAACC AATCACCGCA GCACCCGTTA CGGATACTGC GCATTTCTGT
ATGGGTACGC CTTCCACTGC TTTACAGGTA ACGCCGTCTC CGGGTAATAC GATCAACTGG
TATGACACCA ATCTGAATCC GCTGAATAGC GCACCGCTCA TTACAACGGC AACTGCCGCT
ACTTACCGCT TCTTTGTGAG CCAGACAAAC AGGGAAGGCT GTGAAAGTCC GAAAGCACCT
GTTGTTGCTG TCGTACATCC TACGCTGAAG ATCACCAGTG CAACGGCCAC CAATCCTATC
AGGTGTGGTA TCCCTTCCGG TACGATCACC CTGCATGTAC TGGACCTGAA CAACGGAGCC
GTTCCGGATA TGGACGTCAT CGTACACTAT TACAAGTTCC AGATCCCTTA TAGTTTCAGC
ACCCGTACAG ACGCCAATGG CAACATCAGC GTTCCTTTAA CGGCTGGTAC CTATTCGCAG
ATCTATGTCG AAACAGCCGG TAATTGTCTT GCACAGAAAA TACCGGACGT ATTCATCCTG
CGGGATCCCT CTCCTCCTGC CCAACCGGTA GCCGGATACA ATCCGCCGTT ATGTGCAGGC
GCCACGCTGA CGCTGACGGC TTTATCAGCT ACCAGCGAAG CAAACGGGCC TGTGGAATAT
GTATGGGCCG GACCAGCATT CGGTCCTTTC TCTGACACCA GCAGCAACAC GGTAGTGACA
TTCCCGTCCG TCAGCACCAG CGATGCCGGT ACCTACGCGG TGTATGCCAT GCAGAATAAC
TGTATTTCCC TGCCGGCAGA ATTCGAAGTA AAGGTGACAC AGGGGCCAAC ACAACCTTTG
ATTTCAACAC GCTCGCCTTT ATGTGTTGGT GATGACCTGG TGTTACAGGC GTATAGTTCT
ATTCCGGGAA ACAGTGCACT GACATTTCTA TGGAAAGGTC CCGGGACCGG CTTGCCGTTG
AACAACGCTA ATGTAACCAT CAACAATGTA CAGATCAGTA ACTCGGGGAT CTATACCATC
ACCGTTACTT CTACCGAAAC AGGTTGCAGC GCTTCCGCCG ACACCCTGAT ACAGGTAGGT
GCATATCCGG TCGTTATACT GCCACTGGAT ACGGTCAGTC TGCCGACAGG CCACCTGCTG
CCGCTTACCA CCACCATCAC CAATGCAGAC GATCCTGGTG TATTACCGAT CACACAATAC
AAATGGACGC CTGCACAAAA CCTGAGATGT ACGGATGTGC TTTGCAGCGC ACCCGTAGCC
ACCATCAAAA ACGATATCTG TTACCAGGTA GAAGTAACCA ATGCTTATGG TTGCGCAGCG
AAAGATGAGA TCTGTATAAA AGTATTCTGC CAGGAATCAC AGGTATTCAT TCCAAATGCA
TTTGCACCTG GCGGAGATAT ACCGGAGAAC AGAAGGCTGG TTGTACGGGC TACCGGTATC
AATGCGGTCA AATCATTCAG GGTTTTCAAC CGCTGGGGAA GGATCATGTA TGAGCGGAAC
AATTTCGCCC CGAATGATCC TGCTTTCGGA TGGGATGGAC TGATCAACGG TAAAAGGGCC
GATACAGGCG TATATGTCTA CACCGTAGAG GTAGTCTGCG AAAACGGCGT ACCGTACACC
TTTAAAGGTA ATGTTACATT ATTCTAA
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| Protein sequence | MVVLDLSPPP TVAAGPATYC QNDPATQLTA TGTNLLWYNL ATGGTGSTTA PTPSTNRPGT
FTYYVTQTLP NRCESPRAVI TVIVNARPPA PAVNSPLGLC RNQAATPLTA SGSGLLWYTS
ATGGTGTATA PTPVTTTAGT TTWYVSQTTN GCEGPRAAIE VIVSELAGAP TVSSPVNYCR
SQSATPLSAG GSNLRWYTAA TGGTGSPTAP VPSTATPGST TYYVSQMTGC GESPRAAIVV
NVTASPSASI AYSPAILCNA PNTPATPNPV VHVTHTGAGG GRFSAVPGVG LTIDAANGDI
TPAGANPGTY TIRYTITGTA PCPDYVTTTT VTVNSTPAAT IAYPAICSSD GVTSVQITGA
NGGSFSSTTG LSLNTSTGAI TPGTSTPGTY TVTYTIPPSP PCAGFSTNTQ VTITRAPVAT
ISYQPAVLCN VTGGTPNPPV TPLVTGNTGG TFTITPANGL NINPATGTIT PAGATPGVYT
ISYAITGTGG CALFSTSATV TVNSTPTATI RYAGSPYCGS TNTPQTVTFS GTSGGTFSAG
TGLSINPATG TIDPSQSTPG TYTVQYAIAA APPCPGYSTT ASVSITEQPV ISFPVTTQAI
CAGGSATFRP GSTVPNTTYN WSVVGALPAG VAGISAGSVN GANAAINLSY TNTGNVSQTL
TIRVTPVNPT PSPCTGAVYD LQLTVKPITA APVTDTAHFC MGTPSTALQV TPSPGNTINW
YDTNLNPLNS APLITTATAA TYRFFVSQTN REGCESPKAP VVAVVHPTLK ITSATATNPI
RCGIPSGTIT LHVLDLNNGA VPDMDVIVHY YKFQIPYSFS TRTDANGNIS VPLTAGTYSQ
IYVETAGNCL AQKIPDVFIL RDPSPPAQPV AGYNPPLCAG ATLTLTALSA TSEANGPVEY
VWAGPAFGPF SDTSSNTVVT FPSVSTSDAG TYAVYAMQNN CISLPAEFEV KVTQGPTQPL
ISTRSPLCVG DDLVLQAYSS IPGNSALTFL WKGPGTGLPL NNANVTINNV QISNSGIYTI
TVTSTETGCS ASADTLIQVG AYPVVILPLD TVSLPTGHLL PLTTTITNAD DPGVLPITQY
KWTPAQNLRC TDVLCSAPVA TIKNDICYQV EVTNAYGCAA KDEICIKVFC QESQVFIPNA
FAPGGDIPEN RRLVVRATGI NAVKSFRVFN RWGRIMYERN NFAPNDPAFG WDGLINGKRA
DTGVYVYTVE VVCENGVPYT FKGNVTLF
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