Gene Cpin_5219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5219 
Symbol 
ID8361396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6594622 
End bp6595764 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content51% 
IMG OID644967367 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003124851 
Protein GI256424198 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTCG ATTCATATCA GCTACAGCAA CTCGGTTTGA AAAACCGTAT CGTCATGCCG 
CCTATGACAC GTTCCCGTGC AGCGGCAGGT GAAGTTGCTA CAGATCTTAT GGCGCAATAT
TACAGTCAAC GGGCCGCTGC AGGCTTAATC ATATCAGAAG GAACACAGAT CAGCAAACAG
GGACAGGGCT ATGCCTGGAC GCCCGGTATA TACTCCCCTG CACAGATAGC AGGCTGGAAG
AAAGTGACGG ATGCCGTACA TACTGCCGGC GGACGCATAT TCGCCCAGTT ATGGCATGTA
GGCAGGGTTT CACATACTTC TTTACAGGAG AACGGCGCCG CCCCGGTATC TCCCTCTGCT
ATACAGGCCG AAGGAGTGAA AGTATTCATC GATACAACTG GTAATGGCGC AGATGCCGGC
AAGGGATCGC ATACAGAGAT GGTACAGCAT TCTATGCCGA GAGCACTGAC CATTCCTGAA
ATCAAACAGA TTGTCAAAGA CTACGCGCAG GCAGCTAAAA ATGCCATCGC AGCTGGTTTT
GACGGTGTAG AGCTGCATGG TGCAAACGGC TATCTTATAG AACAGTTCAT AGACTCGCAG
ACGAACCATC GTACGGATGA ATACGGCGGT AGTCTGGGTA ACCGTCTGCG CTTCCTGACG
GAAGTAGTCA CTGCTGTTGC TGACGCTATT GGTAAAGAAC GCGTAGGTGT TCGTCAGGCG
CCTCTGACCA CTTTAATGGG GGCGCAGGAT GACAATCCGG AAGTGACCTA TATCGAGGCC
GCTAAGATCC TGAATGAGAT TGGTATTGCA TATATCCATA TCGCGGAAGC AGACTGGGAC
GATGCACCTG TGATGCCGGT GGCCTTTAAG GAAGCCTACA GAAAAGCATT CAGTGGTACC
CTGATCTACG CCGGTAAATA CACAAAAGAA CGTGCAGAAG AAGCACTGGA GAAAGGATGG
GCTGACCTGA TTGCCTTTGG CCGTCCCTTC ATCGCCAATC CGGATCTGCC TTACAAACTG
GCACATAACC TGCCGCTCAA TACACCCGAC AGACCAACAT TCTTCGGTGG TAACGCAATG
GGTTATACCG ATTATCCTGC ACATAAAAGT GACGCAAATA TCCTGCAACC TGCAACTGTA
TGA
 
Protein sequence
MLFDSYQLQQ LGLKNRIVMP PMTRSRAAAG EVATDLMAQY YSQRAAAGLI ISEGTQISKQ 
GQGYAWTPGI YSPAQIAGWK KVTDAVHTAG GRIFAQLWHV GRVSHTSLQE NGAAPVSPSA
IQAEGVKVFI DTTGNGADAG KGSHTEMVQH SMPRALTIPE IKQIVKDYAQ AAKNAIAAGF
DGVELHGANG YLIEQFIDSQ TNHRTDEYGG SLGNRLRFLT EVVTAVADAI GKERVGVRQA
PLTTLMGAQD DNPEVTYIEA AKILNEIGIA YIHIAEADWD DAPVMPVAFK EAYRKAFSGT
LIYAGKYTKE RAEEALEKGW ADLIAFGRPF IANPDLPYKL AHNLPLNTPD RPTFFGGNAM
GYTDYPAHKS DANILQPATV