Gene Cpin_5216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5216 
Symbol 
ID8361393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6590472 
End bp6591596 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content48% 
IMG OID644967364 
Productacyltransferase 3 
Protein accessionYP_003124848 
Protein GI256424195 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0774273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTATA TGAGTACACA TCCTCTCCCT ACCAAACCAC ATTATCTTGT ACTGGACGGG 
CTACGTGGAG TAGCCGCCTT GATCGTTGTC ATTTTCCACG TATTAGAAGC ACATTCCACG
AGTCACCTCG ATCTGATGAT CAATCACGGT TACCTGGCCG TTGATTTCTT CTTCCTGCTT
TCCGGTTATG TCATTGGTTA CGCTTATGAT GACCGCTGGC AGAAAATGTC TATCGGTACC
TTTTTCAGAC GCCGCCTGGA GCGCCTTCAG CCGATGGTGA TCGTCGGTAT GATCATCGGC
GCCATCTTCT TCTATGCGTC GGATTCACCA CTGTTTCCCA CCATTCATAC CGTACCCGTA
TGGAAACTAT TGGTCATCAT GCTCATTGGT TTTACCCTCA TACCGATCCC CGTTTCCTGG
GATATCAGGG GGTGGCAGGA GATGCATCCG CTGGATGGAC CAGGCTGGTC GCTGTTCTTC
GAATATGTCG GTAATATTCT CTATGCACTC GGTATCAGAA AATTCTCAAA AACAGCACTC
TCTATACTTG TCGGCCTTTC CGCAATTGCG CTTATCTATC TCACCGTATT CGGTCCTACG
GGCGATGTTA TCGGTGGATG GTCTGTCACA CCGGAACAAT TAGGCATTGG CTTTACCCGC
CTGATGTTCC CTTTCTTTGC GGGGCTGTTG TTGTCAAGAG CCACCACACC TACGCGTATT
AGCAATGCAT TCCTGTGGTG TGGTCTGTTA CTGACGATTA CCTTAGCGAT ACCAAGAATC
GGTGGCGCTG ATCATCTGTG GATGAATGGT ATCTATGAAT CCTTTATCAT CATTCTCGTA
TTCCCGCTGA TCGTATATCT GGGCGCAAGC GGCCAGATTC ACAGTAACAG GGAATCTAAA
ATATGTAAGT TCCTGGCGGA TCTTTCCTAT CCTTTGTACA TCACCCACTA TCCGTTTATT
TACGTTTATA CCGGATGGGT AAGTGCACAT AAAGGAACGG ATATGCCACT GGCAGTACTG
TATGGCATTC TGACCTTCGT TGTATCTGTA CTGGTAGGCT ATCTCAGTCT GAAGTACTAC
GACGAACCGG TAAGAGCCTG GTTGAAAAGA AAGGTAAAAG CCTAG
 
Protein sequence
MRYMSTHPLP TKPHYLVLDG LRGVAALIVV IFHVLEAHST SHLDLMINHG YLAVDFFFLL 
SGYVIGYAYD DRWQKMSIGT FFRRRLERLQ PMVIVGMIIG AIFFYASDSP LFPTIHTVPV
WKLLVIMLIG FTLIPIPVSW DIRGWQEMHP LDGPGWSLFF EYVGNILYAL GIRKFSKTAL
SILVGLSAIA LIYLTVFGPT GDVIGGWSVT PEQLGIGFTR LMFPFFAGLL LSRATTPTRI
SNAFLWCGLL LTITLAIPRI GGADHLWMNG IYESFIIILV FPLIVYLGAS GQIHSNRESK
ICKFLADLSY PLYITHYPFI YVYTGWVSAH KGTDMPLAVL YGILTFVVSV LVGYLSLKYY
DEPVRAWLKR KVKA