Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5216 |
Symbol | |
ID | 8361393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6590472 |
End bp | 6591596 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644967364 |
Product | acyltransferase 3 |
Protein accession | YP_003124848 |
Protein GI | 256424195 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0774273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTATA TGAGTACACA TCCTCTCCCT ACCAAACCAC ATTATCTTGT ACTGGACGGG CTACGTGGAG TAGCCGCCTT GATCGTTGTC ATTTTCCACG TATTAGAAGC ACATTCCACG AGTCACCTCG ATCTGATGAT CAATCACGGT TACCTGGCCG TTGATTTCTT CTTCCTGCTT TCCGGTTATG TCATTGGTTA CGCTTATGAT GACCGCTGGC AGAAAATGTC TATCGGTACC TTTTTCAGAC GCCGCCTGGA GCGCCTTCAG CCGATGGTGA TCGTCGGTAT GATCATCGGC GCCATCTTCT TCTATGCGTC GGATTCACCA CTGTTTCCCA CCATTCATAC CGTACCCGTA TGGAAACTAT TGGTCATCAT GCTCATTGGT TTTACCCTCA TACCGATCCC CGTTTCCTGG GATATCAGGG GGTGGCAGGA GATGCATCCG CTGGATGGAC CAGGCTGGTC GCTGTTCTTC GAATATGTCG GTAATATTCT CTATGCACTC GGTATCAGAA AATTCTCAAA AACAGCACTC TCTATACTTG TCGGCCTTTC CGCAATTGCG CTTATCTATC TCACCGTATT CGGTCCTACG GGCGATGTTA TCGGTGGATG GTCTGTCACA CCGGAACAAT TAGGCATTGG CTTTACCCGC CTGATGTTCC CTTTCTTTGC GGGGCTGTTG TTGTCAAGAG CCACCACACC TACGCGTATT AGCAATGCAT TCCTGTGGTG TGGTCTGTTA CTGACGATTA CCTTAGCGAT ACCAAGAATC GGTGGCGCTG ATCATCTGTG GATGAATGGT ATCTATGAAT CCTTTATCAT CATTCTCGTA TTCCCGCTGA TCGTATATCT GGGCGCAAGC GGCCAGATTC ACAGTAACAG GGAATCTAAA ATATGTAAGT TCCTGGCGGA TCTTTCCTAT CCTTTGTACA TCACCCACTA TCCGTTTATT TACGTTTATA CCGGATGGGT AAGTGCACAT AAAGGAACGG ATATGCCACT GGCAGTACTG TATGGCATTC TGACCTTCGT TGTATCTGTA CTGGTAGGCT ATCTCAGTCT GAAGTACTAC GACGAACCGG TAAGAGCCTG GTTGAAAAGA AAGGTAAAAG CCTAG
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Protein sequence | MRYMSTHPLP TKPHYLVLDG LRGVAALIVV IFHVLEAHST SHLDLMINHG YLAVDFFFLL SGYVIGYAYD DRWQKMSIGT FFRRRLERLQ PMVIVGMIIG AIFFYASDSP LFPTIHTVPV WKLLVIMLIG FTLIPIPVSW DIRGWQEMHP LDGPGWSLFF EYVGNILYAL GIRKFSKTAL SILVGLSAIA LIYLTVFGPT GDVIGGWSVT PEQLGIGFTR LMFPFFAGLL LSRATTPTRI SNAFLWCGLL LTITLAIPRI GGADHLWMNG IYESFIIILV FPLIVYLGAS GQIHSNRESK ICKFLADLSY PLYITHYPFI YVYTGWVSAH KGTDMPLAVL YGILTFVVSV LVGYLSLKYY DEPVRAWLKR KVKA
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