| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5213 |
|---|
| Symbol | |
|---|
| ID | 8361390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 6587759 |
|---|
| End bp | 6588823 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644967361 |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_003124845 |
|---|
| Protein GI | 256424192 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000291101 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACATT GTATGCATGC AGCGGTTAAG ACTGCTGACG GAAAGTTTGA CCTTCAGGAG
GTGGACACAC CGCACATTGC GCGACCTGAT TGGGTAGTGG CCCGTGTGCG TGTGTCTGGT
ATCTGTGGTA CTGATCTGCG ACACTGGAAG AAAGCGGAAG CGCCACTCAC CGGGAAAATT
ATGGGGCATG AACTGGCAGG AGAAATCGTA GAAATCGGCA GTAACGTAAC CAACGTAAAG
GTAGGCGACA GGGTAGTGAT AGAGACACTG TTAGGTGATG AGACCTGTGA CTGGTGCCGG
GTGCAACAAT ATAATCTATG TCCTCACCTG TATGAGGTGC GCATGAAAAC CTTATCACAG
GCATTTGCAC AGTATGTAGC GGGACCTTCT GCAAAGTTCT ACCGCCTGCC CGATCATGTC
AGTTTTGAAG AGGCTACTTT ACTGGATACC TTCTCTGTCG GACTCCATGC GATGAATCTC
AGTGGTATAA AGTTGAATGA TAAGGTTGCT GTCATCGGTG CGGGACCTAT AGGTTTGGGA
CAGCTGCAAC TGGCTAAGCT GGCTGGTGCG GACGTTATCA TAACTGATGT AGTTGATTCA
GCGCTTGAGA TGGCCGGAGA ACTGGGCGCT GATGCAGTGG TAAATACGGA TAAGGAAGAT
GGATATCAAA AAGTGATGGA ATTTACGAAG GGCAGAGGAG TCGATATTGC TTTCGAATGT
GCCGGCGGTC CTTCAATGCC GGTGACCTTA CCACAGGCTG TATCTTTCAG CAGGATCGGC
GGTAAGGTTG TCATAGTAGG CGGCTTTGAT GCCGGCGTAA CAAATATCGG CCTCGAGTGG
CAACGGATAC AGATGTCGGA GATACAGCTG ATATCCAGTG CGAGCTATGC TTACCGGGAT
ATTTATCCGG AGATGCAGAT CTGCCTTGAT TTGCTGGCGA AGGGACAAAT GAATGCAAGG
AAAATGATTA CGCATAGTTT TCCACTATCT GAGATTAACA AGGCGTTTGA AGTAGCGGCA
GACAAAACGA AAACACATGC AATATTTGTT GCGCTTACTA TATAA
|
|---|
| Protein sequence | MGHCMHAAVK TADGKFDLQE VDTPHIARPD WVVARVRVSG ICGTDLRHWK KAEAPLTGKI
MGHELAGEIV EIGSNVTNVK VGDRVVIETL LGDETCDWCR VQQYNLCPHL YEVRMKTLSQ
AFAQYVAGPS AKFYRLPDHV SFEEATLLDT FSVGLHAMNL SGIKLNDKVA VIGAGPIGLG
QLQLAKLAGA DVIITDVVDS ALEMAGELGA DAVVNTDKED GYQKVMEFTK GRGVDIAFEC
AGGPSMPVTL PQAVSFSRIG GKVVIVGGFD AGVTNIGLEW QRIQMSEIQL ISSASYAYRD
IYPEMQICLD LLAKGQMNAR KMITHSFPLS EINKAFEVAA DKTKTHAIFV ALTI
|
|---|
| |