Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5211 |
Symbol | |
ID | 8361388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6584638 |
End bp | 6585408 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644967359 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003124843 |
Protein GI | 256424190 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000595972 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACACA CAATGAATGA GAACAACAAT CGTCCGGCGT CTGATATTCA GGGTAAATCT GTTATCATTA CCGGTGGAAC AACCGGTATC GGGAGAGCCA CTGCTATTCT GATGGCATCC CGGGGCGCCA ATGTACTCGT AGTCGGAGAA GATCCTGTTC ACCTGAAAGA CACGATTAGC AGTGTTAATC ATGAAGAACT GGAAGGTAGT CTTACCGGAC TGACGGCCGA TCTGGCGACA GAATCGGGTA TAGACAGCCT CTTTAGTACA GCCGACAAAC AGTTTGATAA ACTGGACATA CTTATTAACA ACGCAGCATT GGCCTGGCAA GGGGTGCAAA GCGGTCGGTA TCAGGATTGG CAAAAGGTCA TTAATACTAA TCTTCTCGGG TACATCGCAT GTACGCAGCA GGCATTGGAG CGTATGAAAA AGCACAAGGA CGGGCATATT GTTAACGTCG GCTCCATGAG TGCAGATGTA CGGGAAAAGG ACAGTTCGGT GTATGTTGCT ACCAAAGCCG GCGTACAGGG ATTTTCGGAA AGTCTGCGTA AGGAGGTAAA TGAACTCGGT ATAAAGGTAT CGCTTATCGA ACCCGGCGCC GTTGGTACAG ATATGCAGCC AGTGAGTGTA CCTGATCAGC AGCAAAAAGA AGAAAAGCTC GAAATGCTGA CTGCTGAAGA TATCGCCGCT GCCGTTTTAT ATGTTGTTTC ACAGCCTAAA AGATGCGATG TCGTTGACGT GAAGATCCGT CCACATCTGC AACTGATCTG A
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Protein sequence | MTHTMNENNN RPASDIQGKS VIITGGTTGI GRATAILMAS RGANVLVVGE DPVHLKDTIS SVNHEELEGS LTGLTADLAT ESGIDSLFST ADKQFDKLDI LINNAALAWQ GVQSGRYQDW QKVINTNLLG YIACTQQALE RMKKHKDGHI VNVGSMSADV REKDSSVYVA TKAGVQGFSE SLRKEVNELG IKVSLIEPGA VGTDMQPVSV PDQQQKEEKL EMLTAEDIAA AVLYVVSQPK RCDVVDVKIR PHLQLI
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