| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5208 |
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| Symbol | |
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| ID | 8361385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6582202 |
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| End bp | 6583176 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967356 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003124840 |
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| Protein GI | 256424187 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000934033 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG CTGTTTTAAA CTACCCTGAC GCCGTTCCCA CCTGTGTAAC AGGTCCGGCA
GATATATGGA GTGGCATGGC CCGTATGTAT CCTGTTCTTA CCGGTATACC GCTAAAAACA
GCTATTCAGA TTGATTTTAT CACACCTGTT GATGGAAAAT TATATGCAGG TGCACCGGCA
GCGTTGCAAT CAAAAACACT CGCCGCGAAA GAAGTATATG ACCTGATCAT CATCCCGGCC
ATGCGTTTTG AAAAGATCGA ACTGGTCGTC GCCAGAGAAC AATTGCTGAT TAAATGGCTG
CAACGGCAAT ACCTGCAGGG CGCTGAACTG GCCAGTATAT GTGTAGGCGC ATTCCTGCTT
GCCGCTACCG GTTTGCTCAG TGGTAAAAAA GCGACTACCA ACTGGCTCTT TGCAGATAAA
TTCAGGAGCC ATCATCCTGA AATAGAAGTC CAGGATGATA AGGTCATTGT TGACCAGGGC
CGCCTCTACT CCTGCGGAGG CGCCTTCAGC TTTACCAGCT TTATGATTTA TCTGATTGAA
AAATTCTGCG GACATGAAGA AGCTGTCATC GCATCAAAAA TACTCATGAT CAACGTGCAT
GAGCAGCCAC AAAGCGCCTT TTCCATCTTT CAGTTCCAGC ACACCCACGC AGATGAAACT
ATCTCTAAGG CACAGCAGCA TATCGAAAAG AATTTTGGTC GGCCGATAAC AATCGATCAA
CTGGCCCGGC ACTGTAATAT GAGCGAACGT AATTTCATCC GGAGATTCGA ACAGGCGACA
ACCAATACAC CGCTTGAATA CATACAGCGT GTACGGGTGG AAGCTGCCAA GAAAATGCTG
GAAGGAAAAA ATGAAGGTAT CGAACAGATT GCCTCAAAAT GTGGGTACGA GGATACTGAC
TACTTCAGAA AAATATTCAA AAGGTATGTG GCAATGACTC CCCGTGCCTA CCAGGAGAAG
TACGGCAAAA GTTAA
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| Protein sequence | MRIAVLNYPD AVPTCVTGPA DIWSGMARMY PVLTGIPLKT AIQIDFITPV DGKLYAGAPA
ALQSKTLAAK EVYDLIIIPA MRFEKIELVV AREQLLIKWL QRQYLQGAEL ASICVGAFLL
AATGLLSGKK ATTNWLFADK FRSHHPEIEV QDDKVIVDQG RLYSCGGAFS FTSFMIYLIE
KFCGHEEAVI ASKILMINVH EQPQSAFSIF QFQHTHADET ISKAQQHIEK NFGRPITIDQ
LARHCNMSER NFIRRFEQAT TNTPLEYIQR VRVEAAKKML EGKNEGIEQI ASKCGYEDTD
YFRKIFKRYV AMTPRAYQEK YGKS
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