| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5201 |
|---|
| Symbol | |
|---|
| ID | 8361378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 6574421 |
|---|
| End bp | 6575146 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644967349 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003124833 |
|---|
| Protein GI | 256424180 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00402172 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACAA CATTTCAGGC AACATTTACT GCCGCCGATA TATTGGCACA ACTCGATGAC
TATGCAGAGA AATTTCAATT TCCCATGCTG GACAACGGGT ATGTTTACCT TGCGGATTCC
CGTTTGTCAG CTTATGGTGA TCGGGAAAGA TGGATCCTGC TCATTGAAGT AATAGGGTAT
AATTACCGTG CCGGTGGTCA TAGCGGAATT GAAAATTGCC TTTATTTTTT TGGTAATTGT
CTGCCGTTTG AGCCTGGTGT ACAGAACTTT AATTTTCTGT CCGTAACAGA CGATTGTGAA
GATGGCGATA CTTTTGATCC GGAGAAAAGA GATACGCTGC ATCCGAAAGC AGTCTCTATG
TTGCTGAACG GGGAAACGAT CCCTGTTTCG CATGATCCGG CCTATTACAG CGCCCGTGGC
GTAGAACTGG AGAAGGCCCC GGCTATCCGT ATATGGGAGT TCTTACGGGC TGTGATCGTT
GACCACAGAG AAGGATTTCT GGCACTGGAA GAAGAGATAA GGGACAGGAT TCCAAAGGAC
CTGCCACTGG TATTAAGACT GGATGAATGG CATCATAATG ACCTGGCAGG AGAGGAGAAA
CCTTCTTCAA CAGAGACTTT TCAGTTGATC GCGCAGATGC TGGAGACGGG CGATCCGGCA
TATTATCAGC CAACAAAAGC GGCGAATAAT CATTGGAAGA ACTGGCCTGA CGGAGGTACA
CTGTAA
|
|---|
| Protein sequence | MDTTFQATFT AADILAQLDD YAEKFQFPML DNGYVYLADS RLSAYGDRER WILLIEVIGY
NYRAGGHSGI ENCLYFFGNC LPFEPGVQNF NFLSVTDDCE DGDTFDPEKR DTLHPKAVSM
LLNGETIPVS HDPAYYSARG VELEKAPAIR IWEFLRAVIV DHREGFLALE EEIRDRIPKD
LPLVLRLDEW HHNDLAGEEK PSSTETFQLI AQMLETGDPA YYQPTKAANN HWKNWPDGGT
L
|
|---|
| |