| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5200 |
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| Symbol | |
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| ID | 8361377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6571890 |
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| End bp | 6574346 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644967348 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003124832 |
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| Protein GI | 256424179 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.441429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAC TATCCGCTAC TATCGTTACT GTCATATTTC TGATCAACAC TGCCCTCGGG
CAGGCAAACG CTATGAGGCT CACAGGCTCC GTCACGGATG ACCAGGGAAT GCCCTTACCA
GGTGTTTCAT TAGCACTGCT ACATGCCAGT GATTCTTCCC TGCAAAAAAC CGGTATCACA
AAAGAAAACG GAACGTTTAT TTTTGAAGAT CTGAAAAGTG GAAGATACCT GCTGATAGCA
ACATATATCG GATTTAAAAG GTATCTCAGT TCGGCCATAA ATATTGATAC AATACAGCAG
GATGTCGCCT TGCCTAACAT TAAGCTGCAA AAAGGCGATG GAGGCAACCT GAAGGAACTG
ACCGTTATCG GACAAAAGCC ATTCCTGGAG CAAAAAATTG ACAGAACGAT CGTTAACGTC
GAGGCGATGG TATCAAATAC CGGCACCAAT GCATTGGAAG TCCTTCAAAA ATCTCCTGGT
ATCGTCGTGG ATGAAAATGG AGAAATAAGT TTGAAAGGCA AATCGGGTGT TGTAGTATAT
ATAGATAACA AACCAACCTA TTTGTCAGGT TCCCAGCTTG CCAGTTATCT CAAATCCTTA
CCGGCAGGCA CCCTTGAGAA AATAGAAATT ATGACCAATC CTCCTGCCAG ATATGATGCC
AGTGGAAACG CCGGTGTCAT TAATATTCTG ACCAAACGTG CGAAAATAAA AGGCTTTAAT
GGCAATATTG CTGCCAACTA TAGTCAGGGT ATCTACTGGC GGACAGATGA AAGTCTTAAT
ATCAATTTCC GCAGCAACAA AATAGCTATC CTGCTGAACG CCAGCTATAA CAATCAGAAT
ACCTTCCGTA AACTCGATCT GAACAGGAAC TATTTTGATG CCGAAAATAA GCTTACATCC
ATATTTCAAC AAACGACACG CTTCAAAAAT GAAAGTGTCT CCTATAATGC GCAAACCCGT
CTTGATTATT ATGTATCTGA TAAAACAACC ATTGGTGTAG CATGGAGTGG TCTGGATACA
AGGCCCGTTG ACCGCCGGAG TATCTATAGC CAGCTACTCA GCAGTACAAT GAAACTGGAT
TCCACAGTGG AAGCAGCTAA CGCGCAATTT TCTAAGTTTA CAAAATCCAA TTTCAACCTC
AATTTTAGTC ACCAATTTGA CAGTACAGGT AAATTACTGA CTGTTGACCT TGATTATATC
CACTATGACA TCAATAATGA CCTCTCTTTT GAAAACCGGC TATACCTTGA TGGCCACATC
TTCAAAAGCG AAGAAAAAAC AGTAGGAGAA CTCCCAACTG GTATAAAAAT ATATTCTGCT
AAAGCGGATT ATAGCTTCAA CCTTTTTAAG AAAATAAAAG CGGAAACAGG CGTAAAAACA
AGCTATGTAT CTACCGACAA TCAGGCCAGT TATTTTGATA TTATAGATGA CCAAAGAGTC
CTGGATTACG ATCTCTCGAA TCAATTTATC TACAAGGAAA ATATAAATGC AGGTTACATC
AACCTGTACC GCGATATTAA ACGGTTTTCA TTTCAGTTGG GACTAAGGCT TGAAAATACG
ATATCAGAGG GACATCAGCT GGGTAATGCG ATGAAGGCTG ACTCTTCTTT CAAACGCGAT
TATACTAACC TTTTCCCGAC TTTCTATATG TCGTATAAAC TTGATAGCGC TGCCAGAAAT
CAGCTTATCT TCTCATATGG CCGCCGGATA AGCCGCCCAT ATTATCAGGA CCTGAATCCC
TTCATATCTC CCCTGGATAA ATTCAGCTAT TTTGCAGGAA ATCCTTTTCT CAAACCGGAG
TTCTCTCACA ACTTCGAATT CTCCTGGTTC TTTAAAAGCA AAATTCTGAC TACTCTCATG
TATAATTATG CTACAGACCT GCGATCTGAA ACAATAGAGC AGACAAATAC AACATTTATC
AGTAGGCCGG GAAATATCGG AACAAGAAAT TATAAAGGAA TCTCTGTGAA TGTCTATCAA
CAGTTCACCA AATGGTGGAG CGCAAATATC TATACAGAGG TCATCAATAA CCACTTTAAT
GGGATGCTTT ACGGACAACC ATTAAGTACC GGCGGTACAT ATTGGTATTC CAACGTAAAC
AATCAATTCA GGTTTGGGAA TGGCTGGAGT GCAGAATTGA GTGGATTCTA TATTACAAAA
AGCGTTACAG CTCAATTCGA TAAAAATTCT ATGTGGCAGC TGAATACAGG CTTGCAAAAG
TCAGTACTGA AAGATAAAGG AACACTAAAA CTGAGTATCC GGGACATTTT CCATAGCATC
CGCTCAGATG GTAATATCAC CAATATAGCT ATGACCACTG CTTCTTTCAG AAACTATCTC
GATACACAGG TAGCGACCAT CGGTTTTGTC TACAATTTTG GAAAAAATTT CAACCAGCGC
CAACGGAAAA CAGGAAGCGC ACAGAACGAA CAAAACCGCG TCAAAGATTC TAACTGA
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| Protein sequence | MKTLSATIVT VIFLINTALG QANAMRLTGS VTDDQGMPLP GVSLALLHAS DSSLQKTGIT
KENGTFIFED LKSGRYLLIA TYIGFKRYLS SAINIDTIQQ DVALPNIKLQ KGDGGNLKEL
TVIGQKPFLE QKIDRTIVNV EAMVSNTGTN ALEVLQKSPG IVVDENGEIS LKGKSGVVVY
IDNKPTYLSG SQLASYLKSL PAGTLEKIEI MTNPPARYDA SGNAGVINIL TKRAKIKGFN
GNIAANYSQG IYWRTDESLN INFRSNKIAI LLNASYNNQN TFRKLDLNRN YFDAENKLTS
IFQQTTRFKN ESVSYNAQTR LDYYVSDKTT IGVAWSGLDT RPVDRRSIYS QLLSSTMKLD
STVEAANAQF SKFTKSNFNL NFSHQFDSTG KLLTVDLDYI HYDINNDLSF ENRLYLDGHI
FKSEEKTVGE LPTGIKIYSA KADYSFNLFK KIKAETGVKT SYVSTDNQAS YFDIIDDQRV
LDYDLSNQFI YKENINAGYI NLYRDIKRFS FQLGLRLENT ISEGHQLGNA MKADSSFKRD
YTNLFPTFYM SYKLDSAARN QLIFSYGRRI SRPYYQDLNP FISPLDKFSY FAGNPFLKPE
FSHNFEFSWF FKSKILTTLM YNYATDLRSE TIEQTNTTFI SRPGNIGTRN YKGISVNVYQ
QFTKWWSANI YTEVINNHFN GMLYGQPLST GGTYWYSNVN NQFRFGNGWS AELSGFYITK
SVTAQFDKNS MWQLNTGLQK SVLKDKGTLK LSIRDIFHSI RSDGNITNIA MTTASFRNYL
DTQVATIGFV YNFGKNFNQR QRKTGSAQNE QNRVKDSN
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