Gene Cpin_5198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5198 
Symbol 
ID8361375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6569729 
End bp6570241 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content42% 
IMG OID644967346 
ProductNusG antitermination factor 
Protein accessionYP_003124830 
Protein GI256424177 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.296838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC TTATTGAAGG CTGGTATGCA TTATACACCA TGCCCAGACA CGAAAAGAAA 
TTACACACCC GACTATCTGA ATTAAATGTC ACATCTTTTT TACCAATGAC CCGGATGCTC
CGTACCTGGC ATGACAGGAA AAAATATGTC GAAATGCCAC TCTTTCCCTC CTACATTTTC
GTTTACCTCA ATAACATCGA GCACTATTAT AACGTACTCA ATACAAATGG CGCCCTGTAT
TATGTAAAAA CGGGTAACGA ACTATCCCGC ATCAGTGAGC AGATTATTCA TTATATCCGT
ATAGTTTCCG AACAAAGTAC CGGGATAGAA TTATCCGCGG ACTATTTTCC TCCCGGAAAA
GAACTACTGA TCAGCAGTGG TCCGCTCGCC GGTTTTTCCT GCGAAGTGGT ATCTTATAAG
AATAGCGAGA AGATACTGGT ACGGGTCAGC CTGCTACAAA GAAGCCTCCT TTGCTCCTAT
ACTGCTGATT CTCTAGGAGA AAAACTTACC TGA
 
Protein sequence
MNKLIEGWYA LYTMPRHEKK LHTRLSELNV TSFLPMTRML RTWHDRKKYV EMPLFPSYIF 
VYLNNIEHYY NVLNTNGALY YVKTGNELSR ISEQIIHYIR IVSEQSTGIE LSADYFPPGK
ELLISSGPLA GFSCEVVSYK NSEKILVRVS LLQRSLLCSY TADSLGEKLT