Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5198 |
Symbol | |
ID | 8361375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6569729 |
End bp | 6570241 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644967346 |
Product | NusG antitermination factor |
Protein accession | YP_003124830 |
Protein GI | 256424177 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.296838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAC TTATTGAAGG CTGGTATGCA TTATACACCA TGCCCAGACA CGAAAAGAAA TTACACACCC GACTATCTGA ATTAAATGTC ACATCTTTTT TACCAATGAC CCGGATGCTC CGTACCTGGC ATGACAGGAA AAAATATGTC GAAATGCCAC TCTTTCCCTC CTACATTTTC GTTTACCTCA ATAACATCGA GCACTATTAT AACGTACTCA ATACAAATGG CGCCCTGTAT TATGTAAAAA CGGGTAACGA ACTATCCCGC ATCAGTGAGC AGATTATTCA TTATATCCGT ATAGTTTCCG AACAAAGTAC CGGGATAGAA TTATCCGCGG ACTATTTTCC TCCCGGAAAA GAACTACTGA TCAGCAGTGG TCCGCTCGCC GGTTTTTCCT GCGAAGTGGT ATCTTATAAG AATAGCGAGA AGATACTGGT ACGGGTCAGC CTGCTACAAA GAAGCCTCCT TTGCTCCTAT ACTGCTGATT CTCTAGGAGA AAAACTTACC TGA
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Protein sequence | MNKLIEGWYA LYTMPRHEKK LHTRLSELNV TSFLPMTRML RTWHDRKKYV EMPLFPSYIF VYLNNIEHYY NVLNTNGALY YVKTGNELSR ISEQIIHYIR IVSEQSTGIE LSADYFPPGK ELLISSGPLA GFSCEVVSYK NSEKILVRVS LLQRSLLCSY TADSLGEKLT
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