Gene Cpin_5176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5176 
Symbol 
ID8361353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6457443 
End bp6457817 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content46% 
IMG OID644967324 
Producthypothetical protein 
Protein accessionYP_003124808 
Protein GI256424155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.019283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTAT GGAGAAGGAA AGCCATTGAA TGTATGCCCG AAAACAGGGC CGAACTGCAA 
AACCCCGGGA GCTCTATCTA TGAAGCATTC TTCGAACTGC TGCCAGCGAT AAGAACCGCC
CACCGGCAAA AGGATACCGC AAAACTAAAA AGCTGTTACG CATTTGCGGA ATGGTGTTTC
AGCCAACGGG AAAAAGACCT CTGGAATGCA GCAGGCGTCG CTTTTTACGA GCATCTTGCA
GACAATGAAG AAACCCTTAA GGAAATGCCC AAATGGGTGA AGAGAAGCAT TTATATACAG
ATACGGGACC TGCTTGTTTT AAGAGTCGGC GAAGACCTTG TAAAACAGAT AGATAAGTTG
TACCAGACGT TCTAA
 
Protein sequence
MSVWRRKAIE CMPENRAELQ NPGSSIYEAF FELLPAIRTA HRQKDTAKLK SCYAFAEWCF 
SQREKDLWNA AGVAFYEHLA DNEETLKEMP KWVKRSIYIQ IRDLLVLRVG EDLVKQIDKL
YQTF