Gene Cpin_5157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5157 
Symbol 
ID8361334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6437156 
End bp6438190 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content46% 
IMG OID644967306 
Productaldo/keto reductase 
Protein accessionYP_003124790 
Protein GI256424137 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0024376 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000123461 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAATGGA CACCTAAAGA CGATCGCTAC GATCATATGT TATATAATCG CTGCGGGAAC 
AGCGGTTTGC AGTTACCTGC TATTTCGCTG GGCCTCTGGC ATAACTTCGG AGACGATGTT
GCACATGGTC GTAAAGTAGA AATATGTACG ACTGCCTTTG ACCTGGGTAT CACACATTTT
GACCTGGCGA ATAACTATGG TCCGCAACCG GGTAGTGCAG AAATTGCCTT CGGTAAAATA
CTCAGGGAAG AGTTTGCCGG TCTTCGGGAT GAACTGGTCA TTTCTTCAAA AGCAGGATAC
CGCATGTGGC CTGGTCCATA TGGTGAATGG GGCAGCAGGA AATACCTGAT CTCAAGCTGT
GACCAGTCCC TGAAGAGATT GGGGGTAGAC TACGTCGACA TTTTCTACTC ACATCGTTAT
GATCCTAATA CGCCGCTGGA AGAAACAATG CTGGCACTGG ATCAGCTGGT ACGTGCAGGT
AAGGCGTTGT ATGTAGGCGT ATCCTCTTAT AATACCGCAA GAACGAAGGA AGCATATGCC
ATCTTAAAAT CATTGGGTAC TCCTTTTATC ATCCATCAGC CAAGTTATTC GATGTTAAAC
AGATGGGTGG AAACGGATGG TCTTTTGGAT ACTTTGACTG ACACCGGACT CGGCTCCATC
GTATTTTCAC CATTGGCACA GGGTATGCTG ACAGATAAGT ATCTGAAAGA GATTCCGGCT
GACAGCAGGG CTAGTCAGGG TAAATCATTG CAGCAGGGAT TTTTAAGTGA GGAGAATATG
GAGAATATCA AGGCGCTGAA TGATATTGCA AAGAGACGTA ACCAGACATT AGCACAGCTG
GCAATCGCCT GGGTATTGAG ACAAAAAGCA GTGACCTCCG CCTTGATCGG AGCCAGCAAA
CCACAGCAGG TGATTGATTG TGTGGGTGCC CTGAAGAATA TCGCATTTAC AGATGCAGAG
CTCAATGAGA TTGATAAGTA TGCACAGAAC GGACATATTA ATATCTGGAG CCAGTCCGCA
GAGATTGATA ACTAA
 
Protein sequence
MKWTPKDDRY DHMLYNRCGN SGLQLPAISL GLWHNFGDDV AHGRKVEICT TAFDLGITHF 
DLANNYGPQP GSAEIAFGKI LREEFAGLRD ELVISSKAGY RMWPGPYGEW GSRKYLISSC
DQSLKRLGVD YVDIFYSHRY DPNTPLEETM LALDQLVRAG KALYVGVSSY NTARTKEAYA
ILKSLGTPFI IHQPSYSMLN RWVETDGLLD TLTDTGLGSI VFSPLAQGML TDKYLKEIPA
DSRASQGKSL QQGFLSEENM ENIKALNDIA KRRNQTLAQL AIAWVLRQKA VTSALIGASK
PQQVIDCVGA LKNIAFTDAE LNEIDKYAQN GHINIWSQSA EIDN