| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5150 |
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| Symbol | |
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| ID | 8361327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6429054 |
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| End bp | 6430754 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967299 |
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| Product | glycoside hydrolase family 39 |
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| Protein accession | YP_003124783 |
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| Protein GI | 256424130 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3664] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0964315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00110099 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGA TCTTACTGTT CAGCCTTTGT ATAGCCCTGG GTGATACTTT ATCCGCCCAA
TCCACCCCTA CTACTTTAAC AGATAATATA CCTGCGTCCA TTGAGGTACG TCTGGGGCAG
ATAACTGGTC CGATGAAACC TGTATGGGCC TGGTTTGGTT ACGATGAACC GAATTATACC
TATATGAAGG ACGGGAAAAA GTTACTCAGT GAAATTGCGG CACTCAGTCC GGTACCGGTA
TATGTCAGGA CGCATAGTCT GCTGGTAAGC GGAGACGGTG TTGCCGCCCT CAAGTGGGGT
TCTACCAATG TATATACCGA AGATGCAAAC GGCCAGCCAG TTTACAACTG GACAATCATC
GACAGCATCT TCGACACCTA TATCAACCGC GGCATGAAAC CGCTGGCACA GATCGGCTTT
ATGCCGCAGG CACTCTCCAC CCATCCTGAG CCCTACCGGC ACTACTGGAA ACCCGGTGAT
CCATATACAG ATATTATTAC CGGCTGGGCA TATCCGCCTA AAGACTATGA CAAATGGCGG
GAGCTTGCCT ATCAGTGGGC TAAGCACTCC GTAGAGCGTT ACGGCCAAAA GGAAGTGGAA
AGCTGGTATT GGGAAGTCTG GAATGAGCCA AACGGTCACT ATTGGAAAGG TACGCGGGAA
GAGTTCTTCA AACTATACGA CTATGCCGCT GATGGCATTA AAAAGGCCCT GTCCACTGCC
AGGATCGGCG GTATCAATAT AGCTGGTACA AGTAGTAAAA CGGCTACTGA ATGGACCACA
CAATTTATTG AGCACTGTAT TTCCGGGACC AATTACGCTA CCGGTAAAAC CGGCGCTCCG
CTGGATGCCT TGTTATTTCA TGCCAAAGGA AATCCTAAAC TGGTCAATGG TATCGTTAGG
ATGAATATGT CGCCTCAACT GCGTGATATA GCAGCAGGTT TCCGTATTGC CGCATCCTAT
CCCCAGACGC GTAATCTGCC ATTGATCATC GGGGAATCAG ATCCTGAAGG TTGTGCTGCC
TGTGGTATGG CTACCAATCC TGAAAATGCC TATCGCAACG GTACACTATA TTCCAGCTAT
ACAGCGGCCT CCTTTGCCCG TAAATACCTG CTGGCCGATC AATACGCGAT CAATTTCCTG
GGCGCCGTAT CCTGGTCATT TGAATTTGAA AACCAACCCT GGTTTTACGG ATTCAGGGAC
CTGGCTACCA ATGGTGTAGA TAAACCGGTG CTCAATGTAT TCCGGATGTT TGGTATGATG
CGCGGCGACA GGGTCAACGT TTCCTCCAGC CGCATGTATC CATTGGAAAC GGTCCTGGAT
TCCAGTATCA GGGGGCAGCA GACCGAAATC GGCGCATTGG CTTCCAAAGC AGCTCACACA
GCAGCGGCAA TGGTATGGAA TTATCATGAT GAAGATAAAA AAGGCCCTGC TGAGCTGGTG
AATCTGACTT TTAAAGACGT ACCGGCCCAA AAGGTAATCA TAAAAACCTA TCTTATAGAT
AGTGATCACA GCAATTCCTA CGAAGTATGG AAAAAGATGG GATCTCCACA GCATCCGACT
AAAAAGCAGA TCAGTACACT GGAAAAAGCA GGAAAGCTAC AGATTGTACA GACAATACAA
AAAGCAAGCA TGAACGGAGA GGTGCAGCTG CCCCTTCGTT TGCAGCGTCA GGCAGTTGCA
CTAGTGACAC TCAGCTGGTA A
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| Protein sequence | MKKILLFSLC IALGDTLSAQ STPTTLTDNI PASIEVRLGQ ITGPMKPVWA WFGYDEPNYT
YMKDGKKLLS EIAALSPVPV YVRTHSLLVS GDGVAALKWG STNVYTEDAN GQPVYNWTII
DSIFDTYINR GMKPLAQIGF MPQALSTHPE PYRHYWKPGD PYTDIITGWA YPPKDYDKWR
ELAYQWAKHS VERYGQKEVE SWYWEVWNEP NGHYWKGTRE EFFKLYDYAA DGIKKALSTA
RIGGINIAGT SSKTATEWTT QFIEHCISGT NYATGKTGAP LDALLFHAKG NPKLVNGIVR
MNMSPQLRDI AAGFRIAASY PQTRNLPLII GESDPEGCAA CGMATNPENA YRNGTLYSSY
TAASFARKYL LADQYAINFL GAVSWSFEFE NQPWFYGFRD LATNGVDKPV LNVFRMFGMM
RGDRVNVSSS RMYPLETVLD SSIRGQQTEI GALASKAAHT AAAMVWNYHD EDKKGPAELV
NLTFKDVPAQ KVIIKTYLID SDHSNSYEVW KKMGSPQHPT KKQISTLEKA GKLQIVQTIQ
KASMNGEVQL PLRLQRQAVA LVTLSW
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