Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5148 |
Symbol | |
ID | 8361325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6426919 |
End bp | 6428160 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967297 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_003124781 |
Protein GI | 256424128 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.114166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.012377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACAG ACGACTTTAC ATCGATGGAA CATGCTTTTG ACGAGAGGAT TGTACGTCTG CTACATCAGC AGCTTACGGG AGAGGTATTG ACTACCGAAG AACAACAGGA GCTGGATACC TGGAAAAATA CGTCTTTGTC TAACACCGCC TTATACGAGA AAATAAATGA TGAAGCCGCG GTACAGCAGA TGCTGCAGAC CTGGCATCAG ATTGAACGTA ACCGGGAACA GAACAAAATA CGCTTTCTCG CCATGCTGCA ACAATTGCAG CCGTCATCTA TCAGCAAACG TCCTTTGCTG CGTTTTCTCA ACAATCAGGT ATTCCGCTAT GCAGCTGCTG TTGTATTGCT CATAGGCGTG GTTACTTTCT TCTGGTTCAA TCAGCATAAA CCCCTTGAAC CAGGTAATAA AGTAGTGTCC GTTGATAAAA ATATGCCTAT AGCACCCGGT CGGGACGGGG CCATACTTAC GCTGGCGGAT GGTTCTACCA TGGTGCTGGA TAGTACCGGC AACGGTGTGG TCGCTGACCA GAACGGCACC AGCGTTGTGC TGCAAAACGG ACAACTGGCC TATAATACGG GTAACGGGGC ATCCGGCGTG GCAGTATATA ATACGGTAAG CACTCCCAAG GGCAGACAGT TCAAGCTGAT ATTGCCTGAT GGTACTAAAG TCTGGCTGAA CGCTGCCAGC GTTATCAGAT ATCCGACCTC TTTTGAAGGA AACGAACGTA ATATATCCTT ACAGGGGGAA GCCTATTTTG AGGTAGCCCG GAATGCCAAA ACACCATTTA AAGTAACTAC AGGCGAAGCC ACCACCATAG AAGTGCTGGG AACCAGCTTT AATATTAATG CATACACCAA CGAAAATACC ATACGGACCA CCCTCCTTGA TGGAGCCGTA AGAATTAATG CCTATCACCA GACAGCTACG CTTAAACCGG GACAACAAGC GGCTGTTAAA CCATCCAAAG GACAACTGGT GGTACTGAAT GCAGTAAATA CAGATCAGGT AATGGCCTGG AAAAATGGGC TGTTCAATTT TGATGATGCC AGCCTCGACG AAGTAATGCG TCAGCTGGAG CGCTGGTACG ACATAGAAGT GGTTTATGAA AAGGGAATAC CAACCGCGCA TTTTGGCGGT GAGATTAACA AACAGAACAC ATTACAAGAT GTATTACATA TCCTGGAAGG GTCCAAAGTA GACTTTCAGC TGGAAGGCCG TAAACTGATT GTAAAGCCAT AA
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Protein sequence | MPTDDFTSME HAFDERIVRL LHQQLTGEVL TTEEQQELDT WKNTSLSNTA LYEKINDEAA VQQMLQTWHQ IERNREQNKI RFLAMLQQLQ PSSISKRPLL RFLNNQVFRY AAAVVLLIGV VTFFWFNQHK PLEPGNKVVS VDKNMPIAPG RDGAILTLAD GSTMVLDSTG NGVVADQNGT SVVLQNGQLA YNTGNGASGV AVYNTVSTPK GRQFKLILPD GTKVWLNAAS VIRYPTSFEG NERNISLQGE AYFEVARNAK TPFKVTTGEA TTIEVLGTSF NINAYTNENT IRTTLLDGAV RINAYHQTAT LKPGQQAAVK PSKGQLVVLN AVNTDQVMAW KNGLFNFDDA SLDEVMRQLE RWYDIEVVYE KGIPTAHFGG EINKQNTLQD VLHILEGSKV DFQLEGRKLI VKP
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