| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5138 |
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| Symbol | |
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| ID | 8361315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6411826 |
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| End bp | 6414195 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644967287 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003124771 |
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| Protein GI | 256424118 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0272944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAGGC ATCTGGGGAA ACTAATTTCA GGACTTGCAC TAATATTATC ATTTTTCTTA
TTTAATATAC CTGCCATCTA TGCCAATTAT ATAGATGACA AGGCAACGGT CATCTCTGGT
ATCGTTGTTA CCAATAATGG AGAACCTGCT CCGGGAGTGA CTGTCATTAT TCAGGAGCTG
TCAAAGGGGG CTATTACGAA TGAAAACGGT TTGTTTAATT TCAAGAATAT TCCGGTTGGT
ACCTATCATC TGAAAGCGTC ATTAATAGGT CTGGAGCCTG TTGTGATAGA GGTGAAGGCA
GAAGAAGGCA GGGAAAACCA TATTAGAATA ACATTGAGCG CTTCTTCGCA GAAACTGGAA
GAAGTAGTGG TAACCAGTGG TGGTAACCGT TTTGGCAGAA AGGAAAGCGT GGATGTTTCC
AAAATGCCCC TGGCCAATAT GGAGAATCCT CAGGTATATA CTGTTGTCAG CAAAGAGCTG
ATGAAAGAAC AGCTGATCAC AGACTATAAC AGTGCTTTTA AGAATGTACC AGGCGCCGGT
GTAGCAGAAA TCAGAAACCA GGGTAGAACG ACATTTATTT CAAGAGGCTT TCCGACACCT
CAGCTGGTGC GTAATGGGGT GAGCAGCTTT ACCTATACAA CGATTGACCC GGTGAACCTT
GAGCGTATTG AGGTAATTAA AGGGCCATCC GCAACATTAT TCGGTAGTAC GGTATCTTCT
TTTGGCGGTC TGTTTAACAG GGTAACCAAA AAGCCGTTGC AGAATGCCAT GGGGGAAATT
TCTTATTCGG GAGGAAGCTG GAACCTGAAC CGCCTCACGA TGGATATCAA CTCCCCGCTG
AATAAAGAGA AAACTGCCTT GCTGAGGGTA AATACCGCTT TACACAGTGA AAATAGCTTC
CAGGATGCGG GCTTCACCAG AAGTTTTCTG ATAGCGCCTA GTTTCTCCTA TGCAGTGAGC
GACAGGCTGA CGCTTTCCCT GGATGTAGAG TTCAGCTTAA ATAAAGCGAC TTCTCCGACG
CGTCTGGCAC CTTATACCAA AGGAACGGCT AAGAGCATCG GAGACCTACA TATTCCTTAC
AAACTTTCTT TTGCAAACAA CACCATCACC TATGGCAGCC AGCAGTATAA TATCTTCGCG
CAGGCGAAAT ATATACTTTC CAAAAGCTGG ACTTCCCAGA CGATTGTTTC CCGTACAAGA
TCTTCTTCTG ATGGTAATGT GGTGCAGTTG ACAATGACCT CAGATACTTC ATTGCGTCAG
TCTGTAACTA ACCAGGATTT TCCTTATTAT GGAACGGATA TTCAGCAGAA CTTCATCGGC
GACTTTAAAA TTGGCGGTTT AAGGAACAGG GTGGTTGCCG GTCTGGATTT TTACAGCCTC
AGGTCAACCC GTAATGATGC TACTGTAAAT CTGACGCCTA TAGATGTCAG AAAGCCAGGT
GCGGGATATA ACAACTTTAC ATTAGAAAAG GTAAAACCGC TCTTTGCAAA TGCTACATAT
TCCAATTTTG TAGCCGGCAG AGAAGAAACC TACAGCGCTT ATGTATCTGA TGTGCTGAAT
ATTACGGAGA AATTACTGGT AATGGCTAGC CTGCGTGTGG ACAGGTACAT GAATAAGGGT
ACTTACTATC CTGCCCAGGA TTCAACAGCA GGCAATTATA ACCAGACAGC TTTGTCTCCC
AAATTCGGGG CGGTATACCA GGTCGTGAAA GACAAGGTAT CAGTCTTCGG AAACTATATG
AACGGATTTA ACAACGTTTC AGGATCTGAT TTTGAGGGTA ATACCTTCAA GCCAACACAG
GCTAATCAAT GGGAGGGAGG TGTGAAATTC GACCTCAACA AGGTGAGTGC AACATTGAGC
TACTATAATA TCTCTGTGAC TAATGTTACC CGTGATGATC CTGAGCATGC GACTTATTCC
CTCCAGGATG GTACACAGTT GAGCAAAGGA TATGAGGTAG AAGTAATCGC AAATCCGGTA
AAAGGGCTGA ACATCGTAGC TGGTTATACT TATAACGATA GTAAATTCAC GAAGGCGAAT
GCGTCTGTAG ATGGGTTGAG GCCGACTACT GCCGGTTCTC CTAAAGTAGG AAACCTGTGG
ATCAGCTACC GTCTGGCGTC GGGAGCAGCT AAAGGATTGG GCTTCGGTTT TGGTGGTATT
TATGCCAGTG AGTATTATCA GACGAATACG ACTGCTTTCA AATTTACCAT TCCTTCCTAT
ACGGTGCTGG ATGCGGCTGT TTTCTATGAC AAGCCGAGCT ACAGAATAGG CTTAAAGGTG
GATAATCTGA CGAATGAAAA ATACTGGTCA TATCGTCTGG CGGCACAGAA TCCTACCCGT
GTTACTGGTA GCGTGACGTT TAAGTTTTAG
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| Protein sequence | MGRHLGKLIS GLALILSFFL FNIPAIYANY IDDKATVISG IVVTNNGEPA PGVTVIIQEL
SKGAITNENG LFNFKNIPVG TYHLKASLIG LEPVVIEVKA EEGRENHIRI TLSASSQKLE
EVVVTSGGNR FGRKESVDVS KMPLANMENP QVYTVVSKEL MKEQLITDYN SAFKNVPGAG
VAEIRNQGRT TFISRGFPTP QLVRNGVSSF TYTTIDPVNL ERIEVIKGPS ATLFGSTVSS
FGGLFNRVTK KPLQNAMGEI SYSGGSWNLN RLTMDINSPL NKEKTALLRV NTALHSENSF
QDAGFTRSFL IAPSFSYAVS DRLTLSLDVE FSLNKATSPT RLAPYTKGTA KSIGDLHIPY
KLSFANNTIT YGSQQYNIFA QAKYILSKSW TSQTIVSRTR SSSDGNVVQL TMTSDTSLRQ
SVTNQDFPYY GTDIQQNFIG DFKIGGLRNR VVAGLDFYSL RSTRNDATVN LTPIDVRKPG
AGYNNFTLEK VKPLFANATY SNFVAGREET YSAYVSDVLN ITEKLLVMAS LRVDRYMNKG
TYYPAQDSTA GNYNQTALSP KFGAVYQVVK DKVSVFGNYM NGFNNVSGSD FEGNTFKPTQ
ANQWEGGVKF DLNKVSATLS YYNISVTNVT RDDPEHATYS LQDGTQLSKG YEVEVIANPV
KGLNIVAGYT YNDSKFTKAN ASVDGLRPTT AGSPKVGNLW ISYRLASGAA KGLGFGFGGI
YASEYYQTNT TAFKFTIPSY TVLDAAVFYD KPSYRIGLKV DNLTNEKYWS YRLAAQNPTR
VTGSVTFKF
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