| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5137 |
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| Symbol | |
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| ID | 8361314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6409376 |
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| End bp | 6411754 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644967286 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003124770 |
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| Protein GI | 256424117 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.11243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGTA ATTACTTCAA AATCGCGTTC AGAACCCTTC TCAAACAGAA GGCGTATTCT
ATCATCAATA TTACCGGGCT TGCCACGGGT ATGGCGGTAG CGATGCTTAT CGGTCTCTGG
ATTTATGATG AGGTGTCCTA TAACAAATAC CATATAAATT ATAACAGGAT CGCAAAAGTC
ATGCAAAGTG CCTCTGTTAA CGGAGAATTT GGAGTAGGTG AATATATGCC TCTTCCGCTA
AGGAACATTT TGCAAACAGA GTTTCAGGAT GATTTTAAAC ATGTCGTTAT TGCAGCCTGG
ATGGAGAATC ACGTCCTGGC TTATGGCGAT CGAAAGATTA CCAAGACAGG TAACTATATG
AGTTCGGAGG CGCCTGAAAT GTTAACGTTA AAAATGGTCC AGGGCACAAT GGATGGGCTA
AAAGAGCCTG CTTCGATTAT GCTATCTTCA TCAGTTGCGC GGGTGCTCTT CGATGACATC
GACCCGATTG GCAAAATCAT GAAGATCGAC AATAAGTTCA GTGTCAAAGT TACCGGCGTC
TACGAGGATT TACCGTACAA TACTGAGTTC CGGGAGATGA CCTTTATTGC GCCCTGGGAA
TTATACGCTT CCTCCGAACC CTGGATCAAG AATACCGCCG GATGGCAAAA CAATTCCTGG
CAAATTCTCG CTCAGCTTTC GAAAAATTCT GATTTTGCTA CCGTTTCAAA AAAGATAAAG
AACCTTAGGG TACTTCACCT CCCCGAAACC GCTTACTCCA ATCCAGAAAT ATTCCTGCAT
CCTATGAGCC GATGGCATCT GTATACAGGG TGGGACAAAT CTGGCAAAGT AGATGGACGA
ATCCAGTATG TATGGTTGTT TGGGATCATC GGTGTATTTG TGCTACTCCT CGCTTGTATC
AACTTTATGA ACCTGTCGAC AGCACGTTCC GAGAAGCGGG CGAAGGAAGT TGGTATCCGA
AAGGCTGTTG GCTCTGTACG TTCGCAGCTG GTCGGTCAGT TTTTCAGCGA ATCACTGATG
GTCACTGCTT TTGCATTTAT ACTTTCACTG CTTCTAACAT TCCTGGTACT TCCCCTATTC
AATGAAATAG CCGACAAACA ACTTTCTCTC CCCTGGAACA AGCCGCTTTT TGGAGTTTTG
GGTTTAAGTT TTAGTATACT AACCGGCCTG ATTGCAGGTA GCTATCCAGC TCTTTATCTA
TCTTCATTTC AACCGGTTAA AGTACTGAAA GGCACATTTC GGGCCGGCCG GTTTGCTTCA
GTACCAAGGA AGGTATTGGT AGTTATCCAG TTTACTGTAT CGGTTACACT CGTCATTGGC
ACAATCATCG TTTTCCGTCA AATTCAATAT GCCAAAAACC GACCTGTAGG TTACAACCGC
GAGGCTTTGA TCACGATTGA CATGAACACG CCGGAGCTGT ATGGACATTA TAATGCGTTA
CGAAGAGAGC TTATTGAAAC AGGTGCAGTT ATTGAAATGT CAACTTCTTC CTCACCGACA
ACTAGTTTAA AATCAAGACA AATTGGATTT GATTGGGAAG GAAAAGATCC AAATCTCAGA
GAGCAACTGG GAACGGTCGC CATAAGCCAT GACTTTGGCA AAACAATAGG TTGGCAGTTT
GTTGCGGGCC GCGATTTCTC ACGCTCATTC GCCACTGATT CTTCAGGAAT GGTGTTAAAT
GAAAGCGCGG CCAGGTACCT GGGATTGAAA GATCCTGTGG GTAAAACTGT AAAATGGAAT
GGTAAGCCTT TTCAAATAAT AGGTATCGTC AAAGATATGT TGATGGGTTC ACCGTTTGAA
CCGGTTTACC AGACTGTTTT CATGTTGGAT TATAATTGGG CAAGCGTCAT CAACATCAAG
TTAAATCCTC AAAACAGCGC AAACGAGTCC TTAAAAAAGA TCGAGGCTGT TTTCCGGAAG
TTCAACCCCG GAAGCCCTTT CGATTATAAA TTTGTCGACC AGCAATATGC ATCAAAATTT
GCTGTCGAAG AGCGTATTGG ACAACTTGCC TGGGGATTTG CTATTCTGGC AATTTTCATC
AGCTGTTTAG GCTTGTTTGG CTTAGCCTCA TTTGTTGCCG AACAACGCAC GAAGGAAATG
GGCGTCCGAA AAGTATTGGG GGCATCAGTC TTCACCCTTT GGAGTTTACT TTCCAAAGAA
TTTGCATTGC TGGTCATCAT TGCTTTTATT ATTGCAATAC CAGCATCTTA TTGTTTTCTG
GAAAACTGGC TTGAAAAATA CGAATATCGT ACAAATATAT CCTGGTGGAT TTTTGCAGTT
GCAGGAGCAG GATCATTACT CATTACGCTA CTGACCGTCA GCTTTCAGAG CATTAAAGCA
GCCATGATAA ATCCTGTAAA GAGCTTGCGC AGTGAATAA
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| Protein sequence | MIRNYFKIAF RTLLKQKAYS IINITGLATG MAVAMLIGLW IYDEVSYNKY HINYNRIAKV
MQSASVNGEF GVGEYMPLPL RNILQTEFQD DFKHVVIAAW MENHVLAYGD RKITKTGNYM
SSEAPEMLTL KMVQGTMDGL KEPASIMLSS SVARVLFDDI DPIGKIMKID NKFSVKVTGV
YEDLPYNTEF REMTFIAPWE LYASSEPWIK NTAGWQNNSW QILAQLSKNS DFATVSKKIK
NLRVLHLPET AYSNPEIFLH PMSRWHLYTG WDKSGKVDGR IQYVWLFGII GVFVLLLACI
NFMNLSTARS EKRAKEVGIR KAVGSVRSQL VGQFFSESLM VTAFAFILSL LLTFLVLPLF
NEIADKQLSL PWNKPLFGVL GLSFSILTGL IAGSYPALYL SSFQPVKVLK GTFRAGRFAS
VPRKVLVVIQ FTVSVTLVIG TIIVFRQIQY AKNRPVGYNR EALITIDMNT PELYGHYNAL
RRELIETGAV IEMSTSSSPT TSLKSRQIGF DWEGKDPNLR EQLGTVAISH DFGKTIGWQF
VAGRDFSRSF ATDSSGMVLN ESAARYLGLK DPVGKTVKWN GKPFQIIGIV KDMLMGSPFE
PVYQTVFMLD YNWASVINIK LNPQNSANES LKKIEAVFRK FNPGSPFDYK FVDQQYASKF
AVEERIGQLA WGFAILAIFI SCLGLFGLAS FVAEQRTKEM GVRKVLGASV FTLWSLLSKE
FALLVIIAFI IAIPASYCFL ENWLEKYEYR TNISWWIFAV AGAGSLLITL LTVSFQSIKA
AMINPVKSLR SE
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