Gene Cpin_5136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5136 
Symbol 
ID8361313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6408364 
End bp6408720 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content44% 
IMG OID644967285 
Producttranscriptional repressor, CopY family 
Protein accessionYP_003124769 
Protein GI256424116 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.110862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0983115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGC TAACGCAGCA GGAGGAGCTG GCGATGCTCG CAATCTGGAA AACCGGTTCC 
GGGTCTGTAA AGGACTTTCT GGAGAACCAT CCTTCGCCTC AGCCGCCATA TACCACATTG
GCTTCCACCA TCAGAAACCT GGAAAAGAAG GCGTATCTCA CAAGTCGCAA GGCAGGTAAC
CTCTACGAGT ACACACCTGC TATTGCAGAA GAAGAGTACA AACAGAAATT CATGAATGGT
TTTGTGAAAG ATTATTTCGA AGACTCTTAC AAGGCGTTGG TTACTTTCTT TGCAAAAGAG
AAGAAAATCA CACCTGAAGA ACTCAGAGAG ATTGTAAGAA TGATCGAAAA AAAGTAA
 
Protein sequence
MEKLTQQEEL AMLAIWKTGS GSVKDFLENH PSPQPPYTTL ASTIRNLEKK AYLTSRKAGN 
LYEYTPAIAE EEYKQKFMNG FVKDYFEDSY KALVTFFAKE KKITPEELRE IVRMIEKK