Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5136 |
Symbol | |
ID | 8361313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6408364 |
End bp | 6408720 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644967285 |
Product | transcriptional repressor, CopY family |
Protein accession | YP_003124769 |
Protein GI | 256424116 |
COG category | [K] Transcription |
COG ID | [COG3682] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.110862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0983115 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGC TAACGCAGCA GGAGGAGCTG GCGATGCTCG CAATCTGGAA AACCGGTTCC GGGTCTGTAA AGGACTTTCT GGAGAACCAT CCTTCGCCTC AGCCGCCATA TACCACATTG GCTTCCACCA TCAGAAACCT GGAAAAGAAG GCGTATCTCA CAAGTCGCAA GGCAGGTAAC CTCTACGAGT ACACACCTGC TATTGCAGAA GAAGAGTACA AACAGAAATT CATGAATGGT TTTGTGAAAG ATTATTTCGA AGACTCTTAC AAGGCGTTGG TTACTTTCTT TGCAAAAGAG AAGAAAATCA CACCTGAAGA ACTCAGAGAG ATTGTAAGAA TGATCGAAAA AAAGTAA
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Protein sequence | MEKLTQQEEL AMLAIWKTGS GSVKDFLENH PSPQPPYTTL ASTIRNLEKK AYLTSRKAGN LYEYTPAIAE EEYKQKFMNG FVKDYFEDSY KALVTFFAKE KKITPEELRE IVRMIEKK
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