| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5133 |
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| Symbol | |
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| ID | 8361310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6405591 |
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| End bp | 6406514 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644967282 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003124766 |
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| Protein GI | 256424113 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0705999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.246476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGG GGAAAGCAGT TACAGTAAAT ACGCGAAATT TGTCAGAGAT ACACCGGGAT
TACGGATTGC CTGTTCCCGC ACATCCATTG ATCAGTTTGA TTGAATGGCC CAAACACCAG
ATACCGAAAA ACAATTTCTC CGGAGCTATT GTGTCTGGAT TTTACCGTAT TACCTTTAAT
ACAGGTTTGA GTGGTAAATC TAAGTACGGC CAGGGCTATT ATGATTATTC AGAAGGAGGG
ATGACCTTCG TAGCACCGAC TCAGGTGATC AGTCCCTGTG TTTATGATGT TGCCGATGAC
TGGTCAATGT ACACGCTATT GATCCATCCG GACTTTCTTT GGAATTATCC AATTGCTAAA
ACCATCAAAC AATATGGCTT TTTCTCTTAT AACACCAATG AGGCGCTCCA TCTTTCAGAT
AAAGAAAAAA GCACCATCAT TGCGATATTT GAAAATATTC AGGATGAACT GAATAGCCGG
ATCGATGACG TCACCCAGAA TGTTATTATC GCCCAGATCG AGTTACTGCT GAGCTATGCT
GACCGGTTCT ATAAACGACA ATTCATAACC CGGAAGGTCG TTAACAACGA TTTATTGCAA
AAGATGGATG ATATGCTGGA TGATTACCTG AACAGCGACA AGACCCTCAG CGAAGGTATT
CCTACCGTGC ATTTCCTGGC GGAGAAGCTG AATGTATCGC CGAGTTATCT GAGTGATATG
GTGCGGTCTG TTAATGGACA AAGTGCCTTA GGTATCATCC ATCAGAAAAT CATCGAAAAG
GCTAAGGAAA AACTTTCGGG TACCAATATG TCTGTTAGTG AGGTTGCATA TGAATTAGGC
TTCGGGCATC CATCATCGTT TACAAAATTA TTCAAGACAA AGACCAATCT GTCACCATTG
GAGTTCCGAA AGTCGTTCAA TTGA
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| Protein sequence | MKQGKAVTVN TRNLSEIHRD YGLPVPAHPL ISLIEWPKHQ IPKNNFSGAI VSGFYRITFN
TGLSGKSKYG QGYYDYSEGG MTFVAPTQVI SPCVYDVADD WSMYTLLIHP DFLWNYPIAK
TIKQYGFFSY NTNEALHLSD KEKSTIIAIF ENIQDELNSR IDDVTQNVII AQIELLLSYA
DRFYKRQFIT RKVVNNDLLQ KMDDMLDDYL NSDKTLSEGI PTVHFLAEKL NVSPSYLSDM
VRSVNGQSAL GIIHQKIIEK AKEKLSGTNM SVSEVAYELG FGHPSSFTKL FKTKTNLSPL
EFRKSFN
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