| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5129 |
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| Symbol | |
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| ID | 8361306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6402905 |
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| End bp | 6403696 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967278 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003124762 |
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| Protein GI | 256424109 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.204744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.374158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAAG GAAATGAATT AAAAAATGAC AAGATTTTAG CCAATGTAAC AGCGCTCGTA
ACTGGTGGAT CACGTGGTAT CGGCCGTGCG ATTGCAGAGC GTCTTGCAGC TGACGGTGCA
TTGGTTGCAA TTACTTATAA TGCAAGTAAA GCATCAGCTG AAGAGGTTGT TGCTGGTATA
GAAAAAACCG GAGGTAGCGC TTTTGCACTA TATGCTGACC TTGTAGACGC TACGGCAATT
CCCGCTTTAT TTGAACAGCT GGACAATGAG TTGAAGAAGC GAACCGGCAG CAACGCGCTG
CATATCCTGG TGAACAATGC TGGTAACTCC GGCTGGGGTG GTCTGGCTGA CGCGACACCG
GTAAGTTGGG ATACGATGTT CGCTGTCCAT GCACGTGCAC CTTTTTTCGT AATACAATCT
GCTTTGAGCC GCCTCGTTGA TGGCGGACGG ATCATCAACA TTTCATCAGG AGCAGCTACC
CGTCCAATGT CGGTAGTGCC TATCTACTCA GCCGCTAAAG CGGCCATTAA TAATTTGACA
CATTCTCTTG CAATCGAGTT GGGGTCGCGT GGTATCACTG TAAATGCAGT AGCGCCGGGC
TGGGTAAAAA CAGATATGAA CGCTGCTGTA CGTGAAAACG TGGACATTGT AAAGACTGTC
ATTGGCGATA CTGCGCTGGG CCGCTTCGGC GAAACTTCGG ACATTGCTGC CGTAGTTGCC
TTTCTCGCCT CGTATGAAGG CCGTTGGGTA ACTGCTCAGG TGATAGAAGC GAGTGGTGGC
TATAAGCTAT AA
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| Protein sequence | MAQGNELKND KILANVTALV TGGSRGIGRA IAERLAADGA LVAITYNASK ASAEEVVAGI
EKTGGSAFAL YADLVDATAI PALFEQLDNE LKKRTGSNAL HILVNNAGNS GWGGLADATP
VSWDTMFAVH ARAPFFVIQS ALSRLVDGGR IINISSGAAT RPMSVVPIYS AAKAAINNLT
HSLAIELGSR GITVNAVAPG WVKTDMNAAV RENVDIVKTV IGDTALGRFG ETSDIAAVVA
FLASYEGRWV TAQVIEASGG YKL
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