Gene Cpin_5121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5121 
Symbol 
ID8361298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6394982 
End bp6395782 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content32% 
IMG OID644967270 
Producthypothetical protein 
Protein accessionYP_003124754 
Protein GI256424101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.197732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAA TACCGTTGAT TTTTGCTTTA ACTTCCGGGC TTACAGTATT CGGACAAACG 
CACAAAACAA AAATTTTATT AATTGGAACT ATTCATTTTG AAACCCCGCA TACAGATGAA
TTTGAATTAA AAGTGGGCGA TTTTCTTAGT GCTAAGCGAC AAAGCGAATT AGAAGACTTC
ACTGACGTGT TGTCTCAAAC AAAAGCTACT AAAGTGATGA TTGAAAGACC GATTGGAAAT
CAACATGCCA CCGACAGCTT GTATGATTTA TATTTAAAAG GTCTTTATAA ACTTACAGTT
TCAGAAAGAG AACAAATTGG CTTTAGGTTA GCGAAAAAAT TAGAATTGAA CCAGGTAAAC
TGTATAGACA AGTTCTATGG AATGTCACAC GATAGCTTAA TGGCTGCGAC CGCAAAAGAA
AATAACCAAC TTTTTTTGCT AAAAGATTTA AGCACCAAGG CAAATGCAAT GCTAAATGAT
TATGATAATA AATTGAAAAA CGGCACACTA ACCGATGTCA TAAAATACTT GAATAAACCT
GAACAGTTAA AAAGAAATTT ATCGCTGTAT CTAAAATTCT TGGCAAAAAT TGGAGCAGGT
AAAAATTTTG TAGGAGCAGA ATCAGTATCA GATTGGTATT TAAGAAACCT TGCTATTTAT
TCAAATATTA TAAATCAGGT TGAGCCTTCG GAAAAATATG TTATTCTAAT CTTTGGCCAG
GGACACATTC CGATATTAAA GCATTTTTTA GAAAATAATG ATGACTTTGA TGTTGTGGAA
CTTAATAACG TATTGAAATA A
 
Protein sequence
MKLIPLIFAL TSGLTVFGQT HKTKILLIGT IHFETPHTDE FELKVGDFLS AKRQSELEDF 
TDVLSQTKAT KVMIERPIGN QHATDSLYDL YLKGLYKLTV SEREQIGFRL AKKLELNQVN
CIDKFYGMSH DSLMAATAKE NNQLFLLKDL STKANAMLND YDNKLKNGTL TDVIKYLNKP
EQLKRNLSLY LKFLAKIGAG KNFVGAESVS DWYLRNLAIY SNIINQVEPS EKYVILIFGQ
GHIPILKHFL ENNDDFDVVE LNNVLK