| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5119 |
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| Symbol | |
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| ID | 8361296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6393217 |
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| End bp | 6393792 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644967268 |
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| Product | peptide deformylase |
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| Protein accession | YP_003124752 |
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| Protein GI | 256424099 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.267223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAATCG TTCCATACGG GTCTCCTATA TTAAGAAAGC AATGCAGCCC TGTAGACAAA
AATTACGATG GACTTGACAA ATTAATCGAA AATATGTGGC ATACACTCGA AAATGCAAAC
GGCAGCGGAT TAGCTACGCC TCAAATAAAT CTTCCCATAA GGATATTTAT TATTGACAGC
GAAACAAGCT TCAATACCAT GAATCCTGAA GAACGAAAAG TACACTTTGA GGGGGATAAT
GGAATACGGG AAGTATTTAT AAATCCTGAG ATAACTGAGT ATTCAGAAGC GAAATGTGAC
GACCTGGAGG GATGTTTAAG CATACCCGGT GTCGCCGCAA TTGTTTCCAG ACCCTATGCT
GTTAAAATAG AATATTATGA TCGCAATTTC CAAAAACATA CAAAAGCGTT TAATGGGTTA
ACTGCAAGGA TAATTCAACA TGAATTTGAT CACATTGAAG GTCGGCTATA TCTTGATTAT
CTGTCATCAT TGAAAATGAA GTTGCTTACT AAGAAATTGG CGCAAATAAA GAAAGGTAGG
TATGCGTGTG AATATCCTAT GCGTAGAATT AAGTAG
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| Protein sequence | MPIVPYGSPI LRKQCSPVDK NYDGLDKLIE NMWHTLENAN GSGLATPQIN LPIRIFIIDS
ETSFNTMNPE ERKVHFEGDN GIREVFINPE ITEYSEAKCD DLEGCLSIPG VAAIVSRPYA
VKIEYYDRNF QKHTKAFNGL TARIIQHEFD HIEGRLYLDY LSSLKMKLLT KKLAQIKKGR
YACEYPMRRI K
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