| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5114 |
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| Symbol | |
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| ID | 8361290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6380832 |
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| End bp | 6382274 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967262 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124747 |
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| Protein GI | 256424094 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.184484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.114098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTAT CATATCAACC ACTCCGTTTA CTATATACAG GACTTACACT GGGTTTGTTA
ATGACAGCCA GCTGTAAAAA AGCGCTGGAG GTAGATCCAC CCAGCACACA GATCGTCAGT
TCACAGGCAT TCGTCAATGA CATGTCGGCC ACCTCGGTGA TGACGGGTAT GTATAGTAAC
ATGATGAGTG GGGCGCAGAA CTTTGTATCC GGCAACAGAA GTATTACCGC CAGGGAATCA
CTGGCTTCGG ACGAACTGGT AAATTACTTA CCTGCTTCAC AGGATGCTAC TTTGACAGAA
TTTTATACCA ATACATACAA TATTTCCAAT CCATATTTCT GGAATGAATT CTACCAGCGC
ATCTACACCT GTAATGCCAC GATAGAAGGC GTTACTGCTT CTACAGGCAT ATCAGATGCC
GTACGTGCGC AATTACTGGG GGAAGCTAAA TTCTTTCGTG CCTTTATCTA TTTCTACGCT
GTGAACACGT ACGGTGATGT GCCGCTGGCA TTGACCACCG ACTACAGGAT TAACAACACG
CTGTCTCGTA CACCCAAAGC CAGGGTGTAT GAGCAGATTG TTGCCGATCT GAAAGATGCG
GAATCACTGA TGGGCAATGA CTATTTCAAA GGCACTACAG CAGGCACCAC AGAGAGAGCA
AGACCCAATA AAGCGGCAGC CAGCGCTTTG CTGGCCAGGG CATACCTATA TATGGAACAA
TGGGCGAATG CGGAAGCGGC AGCAACGAGT GTCATCAACG ATGGTACCTA TTCCCTTGAA
ACAGATCTGA ACAAGGTGTT TGTGAGCACG AGCAAGGAAG CGATCTGGTA TTTGCAAACA
GTATTGGCCA CCAACTATTC GACTTTTGAC GGACAGTATT TTATGCTGAC CAGGGTAGCG
CCAGGCACCA GTGCGCAGAG TCCTGTGGCG ATCCGCCTTT CTTTCTTTGA CAGTTTTGAG
CAGGGAGACG CCCGTCGTAC CAACTGGATT GACACCTTTA CCATCAATAA TACGGATTAC
TACTTCCCTT TCAAATATCA GAAGAACCTG AGCACTACAC CGGAAGCACT GCTGGTATTA
CGACTTGCAG AGCAGTACCT GATACGCGCG GAAGCCAGGG CGAAACTGGG GAATGTAACC
GGCGCAAACA GTGCAGCCTC CGACATCAAT GTGATCCGTA AAAGAGCAGG ACTACCTGAC
ACACAGGCTG CGAATCAGCC GGATATGCTG AAAGTGGTAG CGGCAGAGCG CAGATCAGAA
TTGTTCGCAG AATGGGGACA CCGCTGGTTT GACCTGATCC GTACGGATAA GGTAGATTCT
ATCATGAGTG TACTGACGCC GCTGAAAGGA GGTGTATGGA ACAGCAATTA TAAGATACTG
CCTATTCCGT ACAGCGAAAC ACAGATCAAT ACGAATCTGA AACAGAATCC GGGGTATAAT
TAA
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| Protein sequence | MTLSYQPLRL LYTGLTLGLL MTASCKKALE VDPPSTQIVS SQAFVNDMSA TSVMTGMYSN
MMSGAQNFVS GNRSITARES LASDELVNYL PASQDATLTE FYTNTYNISN PYFWNEFYQR
IYTCNATIEG VTASTGISDA VRAQLLGEAK FFRAFIYFYA VNTYGDVPLA LTTDYRINNT
LSRTPKARVY EQIVADLKDA ESLMGNDYFK GTTAGTTERA RPNKAAASAL LARAYLYMEQ
WANAEAAATS VINDGTYSLE TDLNKVFVST SKEAIWYLQT VLATNYSTFD GQYFMLTRVA
PGTSAQSPVA IRLSFFDSFE QGDARRTNWI DTFTINNTDY YFPFKYQKNL STTPEALLVL
RLAEQYLIRA EARAKLGNVT GANSAASDIN VIRKRAGLPD TQAANQPDML KVVAAERRSE
LFAEWGHRWF DLIRTDKVDS IMSVLTPLKG GVWNSNYKIL PIPYSETQIN TNLKQNPGYN
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