| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5112 |
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| Symbol | |
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| ID | 8361288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6376060 |
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| End bp | 6377277 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644967260 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003124745 |
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| Protein GI | 256424092 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.464276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.312016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATAA CTGAAGCCAT CACTATCGTG ACGAAACTGG CTGAGGGTAC TCCGGTCAGT
GAAGAACGAG TAGCCGCTTT CAGGCTATGG ACCCTGACTG AAGCAACAGA TGAAGAATTA
CAGGCGCTTG CGCGGGCGCA TGAAGCAGTG CTGATGAGCC TGCAGGAAGT GCCTGTATAT
GATAACCGGG AGATTGTCAA TAATATATAT AGCCGGCTGA CGGCCTACTA TCAGGAAGAA
ACAGCAGCAT TGGCAGCAGT AAGGGGGCAG GACAATAATA TCCGGAAGAT CAGGGGACGT
AATTACTGGT GGGTTGCGGC GGCTTCCCTC CTTTTACTGG GAGGCGGTAC TGCCGTATGG
ATGATACGTA CGCAGCGACC ACAACCAGCT GCGATCGTAC AAAAAACAAC GCTTACGCCG
GGTAGCAATA AGGCGGTTTT AACGCTGGCT AACGGGCAAC AGATCATATT AGATAACGCC
GAAAAAGGCA CTATTTCCGA ATCAGGCGGC GTCTCAGTTA TTAAAGCAGA TAGCGGTGCT
ATCGCTTACA GTGGCACAGG AGGCAATATA CAATACCACA CGCTGTCGAC ACCCAGAGGT
GGACAGTTCC AGCTAACATT ACCAGACGGA TCGCATGTAT GGCTGAATGC AGCATCATCT
ATCCGCTATC CGACCGCATT CACGGGGACT GAAAGAAATG TGGAACTTAC CGGAGAAGGC
TATTTCGAGA TAGCCCCAAA CGCCGCCCAA CCATTTACTG TTAAAACCGG CAAAATGGAC
GTACATGTAT TGGGGACAGG GTTTAACATT ATGGCTTATG CCGATGAAAA TGTTGTACGT
ACAACGCTGG TCAACGGATC TGTAAAGGTT GCGGCAGGCG CAACAACAAC GATACTGACA
CCAGGTACAC AGGCCAGTCT ACAGACAGGC GCCGCTGGTT TCACAATCAG CAAACCGGAT
CTGGATGAGG TACTGGCCTG GAAAAACGGA CAGTTCCGTT TCAGCAGGAC CAACATCAAA
CAGATTATGC GGCAGGTATC GAGATGGTAC GACGTAGAAG TAAGTTACGA GGGGAACGTA
GACAATATAG AATTCCAGGG TGTGCTGTCC CGCAAAGTAA CCGCGCAGGC ATTACTGGAA
ACAATCGCAG CAACAGGAGA AGTACATTTC CGTATAACAG GGGATCATAT CAGCGTCATA
CCCGGCGCTG AAAAATAA
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| Protein sequence | MNITEAITIV TKLAEGTPVS EERVAAFRLW TLTEATDEEL QALARAHEAV LMSLQEVPVY
DNREIVNNIY SRLTAYYQEE TAALAAVRGQ DNNIRKIRGR NYWWVAAASL LLLGGGTAVW
MIRTQRPQPA AIVQKTTLTP GSNKAVLTLA NGQQIILDNA EKGTISESGG VSVIKADSGA
IAYSGTGGNI QYHTLSTPRG GQFQLTLPDG SHVWLNAASS IRYPTAFTGT ERNVELTGEG
YFEIAPNAAQ PFTVKTGKMD VHVLGTGFNI MAYADENVVR TTLVNGSVKV AAGATTTILT
PGTQASLQTG AAGFTISKPD LDEVLAWKNG QFRFSRTNIK QIMRQVSRWY DVEVSYEGNV
DNIEFQGVLS RKVTAQALLE TIAATGEVHF RITGDHISVI PGAEK
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