| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5109 |
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| Symbol | |
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| ID | 8361285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6370913 |
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| End bp | 6372142 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644967257 |
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| Product | glycoside hydrolase family 16 |
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| Protein accession | YP_003124742 |
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| Protein GI | 256424089 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0369397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.380992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGGC AAACCCTCTC CACGTTGCTT AGCGTACTGC TGTTGTCAGG AGCAGTAACA
TCCTGTAAAA AAGAAAACAA GGCAGACCAG ACGCCTAAAT TGTCAGCTGA TGACAACACC
CTTGGCGCTG TATCGGCTGC CGCCAGATCT TACAACCTGA TATGGTCTGA TGAATTTGAC
GGTACCAGCC TGAATACTTC CAAATGGGGG TATGAAAATG GTAACCTCGG TGTCAACAAT
GAAAAGCAGT TTTACCAGAC GCAGAACGTT GCTGTCAGCA ATGGTAACCT GGTCATCACT
GCCCGTAAAG AAAGCGTTGC CGGACAACCC TACACTTCCG GCCGTATTAA CAGTAACGGT
AAATTCTCAA CCAGGTATGG TCGTATTGAA GCCCGTATCA AGCTCCCTGC AATACAGGGC
TTATGGCCTG CATTCTGGAT GCTGGGTAAC AGTATCAGCA CCGGCGCCGG CTGGCCTGCC
TGTGGTGAAA TTGACATCAT GGAGCATGTA AACACCGGTA ATACCGTGCT GGGTACGATC
CACTGGTTTA ACACCGTTTA TTCCTATTAT GGTGGTAACA CGAACACCAC ACCGACTGAC
TATCACGTGT ACGCGGTAGA TTGGGATGCA TCCGCTATCC GCTGGTATGT GGATGGTGTA
CAGTTTCATG AAGCAAACAT CCTGAACAAC ATCAACGGTA CAGAAGAATT CCATGCGCCT
TTCTTTATCC TGCTGAACGT TGCCGTAGGG GGTAACCTGC CAGGTAACAA TATCAACGAT
GGCGGACTGC CTGCTTCCAT GCTGGTGGAC TACGTAAGAG TGTACAGCAT CACCGATACA
CCTGGTGGTG GTACTGCTCC GATCGGTTCT ACTATCACGA TCAAAGGCAG CAACGGTCTG
TTTGCCAGCG GTGAAAATGG TGCACAGGCC ATGACCTGCA ACCGTCCGAC CGCACAGGCA
TGGGAACAGT TCACCGTAGT AGATGCCGGC GGTGGTAAAG TCGCACTGCG TAGCCAGGGC
ATGTATGTTT CCTCCGAAAA CGGCGCTCAG GCAATGACTT GTAGCCGTCC GACCATCCAG
GATTGGGAAA AATTTAATTG GATTGATAAT GGCGATGGTA CTTTCTCTCT CCGTGGCAAT
AATGGATCAT ATGTCTCCAG CGAAAACGGT ACCCAGGCAA TGACCTGTAA CCGTCCGACG
ATCCAGGGCT GGGAGAAATT CACCCGCTAG
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| Protein sequence | MKRQTLSTLL SVLLLSGAVT SCKKENKADQ TPKLSADDNT LGAVSAAARS YNLIWSDEFD
GTSLNTSKWG YENGNLGVNN EKQFYQTQNV AVSNGNLVIT ARKESVAGQP YTSGRINSNG
KFSTRYGRIE ARIKLPAIQG LWPAFWMLGN SISTGAGWPA CGEIDIMEHV NTGNTVLGTI
HWFNTVYSYY GGNTNTTPTD YHVYAVDWDA SAIRWYVDGV QFHEANILNN INGTEEFHAP
FFILLNVAVG GNLPGNNIND GGLPASMLVD YVRVYSITDT PGGGTAPIGS TITIKGSNGL
FASGENGAQA MTCNRPTAQA WEQFTVVDAG GGKVALRSQG MYVSSENGAQ AMTCSRPTIQ
DWEKFNWIDN GDGTFSLRGN NGSYVSSENG TQAMTCNRPT IQGWEKFTR
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