Gene Cpin_5106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5106 
Symbol 
ID8361282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6366398 
End bp6367018 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID644967254 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003124739 
Protein GI256424086 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.248862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.417373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATA CAAACACGAC ACCATTCAAT CCGGATGTAC AGAATACATC TAATGACGCC 
TTAATCGTAG CGGCACTGGA GCGGGTAGGC GAATCTTTCC GTGTGATGCT GTGGGAACAG
GCAAAGGAAC ATGGTTTGAG TCCGATACAG ATCCAGTCGC TGATCTTCCT GCATACCCAC
GATGAATCAA TGGCGACAGT CACCTATCTG TCCAGGGAGT TTAATGTTAC CAAAGCCACG
ATCAGCGATG TGATAAAAGT GCTGGTAGAA AAGAAGCTGG TGGTGAAGAA GGATAATCCG
GCGGACAGTC GTGCACAGGT ACTCAAATTA ACGGCAGCAG GCAAAAGGAT TGCGGAGTCT
GCGGGCGGTT TCGCCAATAC GCTGTTGAAG TATGTGAGTC AGTTGCCGGA TACGCAGAAG
GCCGGACTGA AAATAGTATT ACTCAATCTT ATCTTCCAGC TGCACAATGA GCAGATCATC
ACGATGCAGC GCATGTGTTT TACCTGTACG CATTACTCAG GTAGTGGCAA CAAACACTTC
TGTAATCTCT TGCGTATCCC GTTGGTAGCG GATACGCTTC GGCTGGATTG TCCGGAGCAT
GAACAAAAGA AAGCGGGATA G
 
Protein sequence
MSNTNTTPFN PDVQNTSNDA LIVAALERVG ESFRVMLWEQ AKEHGLSPIQ IQSLIFLHTH 
DESMATVTYL SREFNVTKAT ISDVIKVLVE KKLVVKKDNP ADSRAQVLKL TAAGKRIAES
AGGFANTLLK YVSQLPDTQK AGLKIVLLNL IFQLHNEQII TMQRMCFTCT HYSGSGNKHF
CNLLRIPLVA DTLRLDCPEH EQKKAG