Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5106 |
Symbol | |
ID | 8361282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6366398 |
End bp | 6367018 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644967254 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003124739 |
Protein GI | 256424086 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.248862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.417373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATA CAAACACGAC ACCATTCAAT CCGGATGTAC AGAATACATC TAATGACGCC TTAATCGTAG CGGCACTGGA GCGGGTAGGC GAATCTTTCC GTGTGATGCT GTGGGAACAG GCAAAGGAAC ATGGTTTGAG TCCGATACAG ATCCAGTCGC TGATCTTCCT GCATACCCAC GATGAATCAA TGGCGACAGT CACCTATCTG TCCAGGGAGT TTAATGTTAC CAAAGCCACG ATCAGCGATG TGATAAAAGT GCTGGTAGAA AAGAAGCTGG TGGTGAAGAA GGATAATCCG GCGGACAGTC GTGCACAGGT ACTCAAATTA ACGGCAGCAG GCAAAAGGAT TGCGGAGTCT GCGGGCGGTT TCGCCAATAC GCTGTTGAAG TATGTGAGTC AGTTGCCGGA TACGCAGAAG GCCGGACTGA AAATAGTATT ACTCAATCTT ATCTTCCAGC TGCACAATGA GCAGATCATC ACGATGCAGC GCATGTGTTT TACCTGTACG CATTACTCAG GTAGTGGCAA CAAACACTTC TGTAATCTCT TGCGTATCCC GTTGGTAGCG GATACGCTTC GGCTGGATTG TCCGGAGCAT GAACAAAAGA AAGCGGGATA G
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Protein sequence | MSNTNTTPFN PDVQNTSNDA LIVAALERVG ESFRVMLWEQ AKEHGLSPIQ IQSLIFLHTH DESMATVTYL SREFNVTKAT ISDVIKVLVE KKLVVKKDNP ADSRAQVLKL TAAGKRIAES AGGFANTLLK YVSQLPDTQK AGLKIVLLNL IFQLHNEQII TMQRMCFTCT HYSGSGNKHF CNLLRIPLVA DTLRLDCPEH EQKKAG
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