| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5091 |
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| Symbol | |
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| ID | 8361267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6338502 |
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| End bp | 6340094 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967239 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124724 |
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| Protein GI | 256424071 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0871093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.523706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAGC AATTCATATA TCAGGTAGTA CTGGCAGGCG CAATGGTATG GGGACTTACT
TCCTGTACCA AAGATCTGGA CCGTACACCG ATCACAGAGG CTACATCAGC CAGCGTGTAT
AAAGACTTTT CCAATTATAA AGCCATCCTG GCTAAATTAT ATGGTGGTTT CTCTGTTACC
GGACAGGTTG GTCCGACAGG TAGCCCCGAT ATCAGCGGTA TCGATGAAGG TACATCCAGT
TATATCCGCG GATATTATCA GATGCAGGAA CTGCCTACTG ACGAAGCAGT GATTGGCTGG
AATGACGGTA CATTACAGGA TTTTCACCAG ATGGACTGGA CGCCTGATGA TAACTTCATC
AATGCCATGT TTGCCCGTCT GTTCTATCAG ATCGCACAGT GTAATGAATT TATCAGACAG
ACCAGCGATG ATAAACTAAG CAGCAACGGT ATCGCAGAAA AAGATCGCGA AACAGCACAT
ACCTTCCGTG CAGAAGCACG CTTTCTGCGT GCATTGAGTT ACTATCACGC GATGGACCTC
TTCGGTAGTG TACCATTTGT GACAGATAGT AATGAAGTGG CCTACTATTA TCCCAACCAG
ATCTCCCGTA CTGACCTGTT CTCTTACATA GAACGTGAAT TGTTAGCAAT TGAAGGAGAA
ATGGCAGAAG CCCGTGCAAA TGAGTATGGT CGTGCTGATA AAGCCTGCGT ATGGGGATTG
CTCGCAAAAT TATACCTGAA CGCTGAAGTG TACACAGGTA CTGCCCGTTA TACCGATGCG
GTTACCTATA GCGCTAAAGT GATCAATTCC GGTTACACAC TGGCTAATAG CTATGCTAAT
ATGTTCAAGG CTGATAACAA CGTAACCTCG GAATCAGAAT TGATGCTCAC GGCCAACTTT
GACGGCGCCC GCACACAGAC ATATGGTGGT ACCACTTACC TGATACATGC TGCTGTCGGT
GGTAGTATGA ATGCTGCTGA ATTTGGTGTA AACAGTGGCT GGGGTGGTTT ACGTACCACC
AGTGCATTTG TGGCACTGTT CAGCGATATT ACCGGCGCTA CTGATAAACG CGCCATGTTC
TACACTGCTG GCCAGAACCG TGAGATAGCT GATCTGGGTA CATTCACCGA TGGTTATGCC
ATCACAAAAT GGTCTAATAA GACTTCTAAA AATACAGATG GTTCCAACTC CACTTTCGTG
GATACCGACT TCCCGCTGAT GCGTCTGGCA GAAATGCATC TGACCTATGC AGAAGCCGTA
TTACGGGGCG GTACAGGTGG TTCCACCAAC CAGGCCGTGA CATATATCAA TGATCTGCGT
CAGCGTGCAT ATGGCAATAC TTCCGGCAAC ATTACCGCTG CTCAGCTGAA CCTGAGATTT
ATCCTGGATG AAAGAGGTCG TGAGTTGTAT TGGGAAGGAC ACCGCAGAAC TGACCTGATC
CGCTACGGAC TGTTTACCGG TGCTGCTTAT GTATGGCCGT TCAAAGGCGG CGTAGCAGCA
GGAGCGGCAG TAGGTGATTT CCGTACGGTA TATCCGATTC CAACTACTGC AAGGGTGGCT
AATCCCAACC TGAAACAGAA CGACGGTTAT TAA
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| Protein sequence | MTKQFIYQVV LAGAMVWGLT SCTKDLDRTP ITEATSASVY KDFSNYKAIL AKLYGGFSVT
GQVGPTGSPD ISGIDEGTSS YIRGYYQMQE LPTDEAVIGW NDGTLQDFHQ MDWTPDDNFI
NAMFARLFYQ IAQCNEFIRQ TSDDKLSSNG IAEKDRETAH TFRAEARFLR ALSYYHAMDL
FGSVPFVTDS NEVAYYYPNQ ISRTDLFSYI ERELLAIEGE MAEARANEYG RADKACVWGL
LAKLYLNAEV YTGTARYTDA VTYSAKVINS GYTLANSYAN MFKADNNVTS ESELMLTANF
DGARTQTYGG TTYLIHAAVG GSMNAAEFGV NSGWGGLRTT SAFVALFSDI TGATDKRAMF
YTAGQNREIA DLGTFTDGYA ITKWSNKTSK NTDGSNSTFV DTDFPLMRLA EMHLTYAEAV
LRGGTGGSTN QAVTYINDLR QRAYGNTSGN ITAAQLNLRF ILDERGRELY WEGHRRTDLI
RYGLFTGAAY VWPFKGGVAA GAAVGDFRTV YPIPTTARVA NPNLKQNDGY
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