Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5086 |
Symbol | |
ID | 8361262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6331050 |
End bp | 6332423 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644967234 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003124719 |
Protein GI | 256424066 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0501179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.911731 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAA TGGCTAAGCC GCGGTTGTCC GCTGCGCGCA TATGGAACAT GAGCATGGGC TTTTTCGGTA TCCAGTTTGG TTTTGCTTTA CAAAATGGAA ATGCCTCCCG TATTTTGCAA ACCTATGGAG CGGAAGTAGA GCACCTGTCC CTTTTCTGGC TGGCAGCTCC GCTGACCGGT ATGATCGTAC AGCCTATTAT CGGCCACTAT AGCGACCGCA CCTGGAATAA ACTGGGACGT CGCAGACCTT ACTTTCTTGT AGGTGCTATC GCTACGGCAC TGGCGCTGAT GTTACTGCCT AATTCCTCAT TACTGGCAGC TATGCTGCCG CCGGTATTGA TAGGGGCGGG TATGCTGACA TTGATGGATG CTTCTATCAA CGTGGCCATG GAACCTTTCC GGGCACTGGT GGCGGATAAC CTGCCGGATG AGCAGCGGAG CCAGGGATTC TCTGCCCAGA CCTTTCTGAT AGGGGCAGGG GCCGTACTGG GTTCCTCTTT GCCGTATCTG CTGGCAGAAT ACATGGGCGT ATCCAAAACA GCGGCGCCGG GTGTAGTACC TGATAATGTG ATCTATTCCT TTTATGTAGG CGCGCTTGTA TTGCTTACTA CGATTCTCTG GTCGATATTT ACATCATCAG AATATTCTCC GGAGGAGTTT GCAAAATTCA ATCCTGGACA GGCTGCAGAG CAGCATGGCG GCGGATTGAA AACGATCCTC AAGGATTTTT CCAATATGCC TTCGGCAATG AAACAACTGG GACTGGTACA ATTCTGCTCC TGGTTCGCCT TATTCTCTAT GTGGGTATTT ACTACACCAG CAGTCGCGCA CCACATTTAT AAAGTAATGC CCGGCGATAC TTCGTCTGCA CTTTTTGCTG ATGCCGGCAA TAAGGTGGGT TTCCTGTTCA GTATCTACAG TGCGGTGTCA GCAGTATATG CGCTGGTACT ACCGGCTATT GCCCGCAAAA CTTCCCGCAG GGCCGCACAT GCTATTTCCC TGACAGCAGG TGGATTATCA CTCATTTCAT TTTATTTTAT ACAGAACCCT GATCTGCTGA TCTGGCCAAT GATCGGTATT GGTATGGCAT GGGGTAGTAT CCTGTCAACA CCATACGCGA TATTGTCCGG GGTAATACCG TCTCACAAAA CGGGTGTATA CATGGGTATC TTTAATTTCT TCATCACCTT CCCGCAGATT GTCAATGGCA TCTTCGGAGG ACTGATCGTA AAGCACCTGT TCCAGGGAGA AGCTGTTTTC GCACTCGTGA TGGGCGGCGC ATTTATGATC ATTGCTGCGA TAGCGGTAAT GTATGTGAAG GATAGAGAAA AGACAGCTGC GGAACAATTG GTGTCAACTT ATGGTGTAGC GTAG
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Protein sequence | MKGMAKPRLS AARIWNMSMG FFGIQFGFAL QNGNASRILQ TYGAEVEHLS LFWLAAPLTG MIVQPIIGHY SDRTWNKLGR RRPYFLVGAI ATALALMLLP NSSLLAAMLP PVLIGAGMLT LMDASINVAM EPFRALVADN LPDEQRSQGF SAQTFLIGAG AVLGSSLPYL LAEYMGVSKT AAPGVVPDNV IYSFYVGALV LLTTILWSIF TSSEYSPEEF AKFNPGQAAE QHGGGLKTIL KDFSNMPSAM KQLGLVQFCS WFALFSMWVF TTPAVAHHIY KVMPGDTSSA LFADAGNKVG FLFSIYSAVS AVYALVLPAI ARKTSRRAAH AISLTAGGLS LISFYFIQNP DLLIWPMIGI GMAWGSILST PYAILSGVIP SHKTGVYMGI FNFFITFPQI VNGIFGGLIV KHLFQGEAVF ALVMGGAFMI IAAIAVMYVK DREKTAAEQL VSTYGVA
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