| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5072 |
|---|
| Symbol | |
|---|
| ID | 8361248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 6317091 |
|---|
| End bp | 6318185 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644967220 |
|---|
| Product | HEAT domain containing protein |
|---|
| Protein accession | YP_003124705 |
|---|
| Protein GI | 256424052 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4335] DNA alkylation repair enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.946755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.336165 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTGC TGAAAGATCT CTACTCCCCT GCCTTTTACG ACGGATTGGC CAATATACTG
GTAAAAACGA TTCCTGCATT CAATAAACAA AAATTCATCC AACGGATCTA CCAGCCAGGT
TTTCAAGAAA AAGAGCTGAA AGAGCGGATG AAACACACCA CGGAGGTATT ACATGAGTTT
CTGCCTGCTG ACTACAAAAA GGCGGTCCCA TTGATCAAAG ACAGTATCGA CGCGCTCAGA
AAGGCGGGTT ATGGAGAGGC GCTGGAATTT ATCTTCTTTC CGGATTATCT GGCTACTTAC
GGACTGGAAC ACTACGATAT ATCCGTAAAA GCCCTTGAGT TTGTGACACA GTTTATTACC
TGCGAATTTG CGGTAAGGCC GTTTCTGATT AAATATGGCG ACAAAATGAT GCAACAGATG
CAGACCTGGT CTTCGCATAA AAACGCCAAA GTACGCAGAT TGTCCACAGA GGGCTGTCGT
CCCCGACTTC CCTGGGCAAT AGCAGTACCA TTCCTGAAGA AAGATCCGTC TTCCATACTT
CCTATCCTGG AAAACCTGAA ACAGGATCCT TCCGAGTCCG TAAGACGTAG CGTGGCCAAC
AACCTCAATG ACATTGCCAA GGACCATCCG CGTCTGGTCA TTGCCATCGC TTCCAAATGG
AAGGGGCTTG GTAAAGAAAC AGCTGCCATT ATTAAACATG GCAGCCGTAC CCTGCTCAAA
CAGGGACATA AAGAAATCCT GGCTCATTAT GGCCTGGAAA GCGTGCATGT TGCCTTCAGC
AACTTCAAAG TACTGACTCC GAAAGTGAAA ACCGGCGATA GTCTGGCATT CTCGTTTACC
GTCAGGAATA AAGATGCGCA GGCACAGACC ATCCGGCTGG AATATGGCAT TTATTACCTG
AAACAGAATG GTACTTTATC TAAAAAGGTG TTCAAGATCA GTGAAAAGGC CTATAAACCG
GGAGTGCAGG TCGAAATTAT ACGTAAACAG TCCTTCCGGC TGATCACAAC ACGGGTATTC
TACCCCGGCA AACACCAGCT TTCTATCATC ATCAACGGAG AAGAACAACC CGCCAGAAGC
TTTGAGCTGA TCTAG
|
|---|
| Protein sequence | MSLLKDLYSP AFYDGLANIL VKTIPAFNKQ KFIQRIYQPG FQEKELKERM KHTTEVLHEF
LPADYKKAVP LIKDSIDALR KAGYGEALEF IFFPDYLATY GLEHYDISVK ALEFVTQFIT
CEFAVRPFLI KYGDKMMQQM QTWSSHKNAK VRRLSTEGCR PRLPWAIAVP FLKKDPSSIL
PILENLKQDP SESVRRSVAN NLNDIAKDHP RLVIAIASKW KGLGKETAAI IKHGSRTLLK
QGHKEILAHY GLESVHVAFS NFKVLTPKVK TGDSLAFSFT VRNKDAQAQT IRLEYGIYYL
KQNGTLSKKV FKISEKAYKP GVQVEIIRKQ SFRLITTRVF YPGKHQLSII INGEEQPARS
FELI
|
|---|
| |