| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5066 |
|---|
| Symbol | |
|---|
| ID | 8361242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 6311230 |
|---|
| End bp | 6311883 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644967214 |
|---|
| Product | lipolytic protein G-D-S-L family |
|---|
| Protein accession | YP_003124699 |
|---|
| Protein GI | 256424046 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0170642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.012377 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAT TAATCTACCT TTTAGCACTG TCACTGACTG TTTGTACCAT ATTACATGCG
CAGAAATACC AGGAGGATGT CAATACCATT CTGAAGTATG ATAAAATGTA TGCTCCTCCT
GCCAATCCTA TTCTTTTTAT CGGTAGTTCT TCCATCCGTA AATGGGATGA CCTGGAAAGG
ACATTTGCCA GCTATGTCGC TATGAACAGG GGCGTAGGTG GTGCTGTCAC CAATGATATT
ATATATTATG CCAATGATAT TATATTTCCC TATCATCCAC GTGAGATCGT AATATATGTA
GGAGAGAATG ACCTCGTCGA AAAAGGCATT ACTGCAGATA GTATCTTCAA CAGATTTAAA
AATCTCTACA GTACTATCAG AACGAAACTG CCTGAAGTGC CTATCGTTTA CATTTCTATC
AAACCAAGTC CCAGCAGAGA ACAGTTCCTG CCTATTGCAA AGGCTGCAAA TGCGTTGATA
AAAGACTACA TTTCCGGTCA ATCTCATATC AGTTATGTGA ACGTTTTTTC TTTGATGCTG
GATAAGGAAG GGAAGCCACG GGAAGAGCTG TTTGTGGGAG ATATGTTGCA TATGAATGCA
CAGGGGTATG CGATATGGAG GAAGGCGGTG GAGCCGTATC TGAAGAAGAA ATAA
|
|---|
| Protein sequence | MKKLIYLLAL SLTVCTILHA QKYQEDVNTI LKYDKMYAPP ANPILFIGSS SIRKWDDLER
TFASYVAMNR GVGGAVTNDI IYYANDIIFP YHPREIVIYV GENDLVEKGI TADSIFNRFK
NLYSTIRTKL PEVPIVYISI KPSPSREQFL PIAKAANALI KDYISGQSHI SYVNVFSLML
DKEGKPREEL FVGDMLHMNA QGYAIWRKAV EPYLKKK
|
|---|
| |