| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5049 |
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| Symbol | |
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| ID | 8361225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6296227 |
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| End bp | 6297768 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967197 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_003124682 |
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| Protein GI | 256424029 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.495735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00234042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATACAGA GAGATGGCGC ACAAACCAGT TTATGGCAGG GTAATGTACC ACCTTACATT
ACTACCAGCA GAGCCGAAAG AAAGACCGTA TACGACGTAG TGATCGTAGG GGGCGGGATT
ACAGGATTGA CGACGGGACT GCTGCTACAG GAGGCCGGGA AGCAATGCCT GATTGTTGAA
GCCAACGATC TGGGTTTCGG TACCACGGGA GGCACCACCG CCCACCTGAA CACCCTGCTG
GACACTCCTT ACTACGTGAT CGCAAAGAAT TTCGGGGAGG ACAATGCAAA ACATGTTGCA
CACGCAACTG CAGAGGCCCT CAATCTGATA AGAAATAACG TAAACAGATT CAATATTGAT
TGCGGATACC AGGAGGCGGA TGCTTTTCTC TTTGCCCAGG ATGCTGATCA GGAAAAGGAA
CTGGAAAAAA TAAGACAAAC TTCTGCCGAC GCCGGTCTAC AAATAGACTA TATACAGGAC
ATTCCGGTGA ATGTGCCTTT TACAAAAGCG GTACGTGCTG CGGGACAGGC AAAATTTAAT
CCGCTGGAGT ACATACATGG CATTGCGAAA GCCTTTGAGG CCGCTGGTGG TACCATCTTG
CAACAATGCC GGGTGATCAA TGTAACGGAA GACGATACGA TGAAAGTAGC GACAACTGCC
GGTGTGTTCA GTTCGGTTGA TGTTGTGTAT GCGACACATA TTCCGCCAGG TATCAATTTA
TTGCACCTCC GTTGTGCCCC TTATAGAAGT TATGCCATGG CGGTCACACT GGAAGACGAT
GCTTATCCGG AAGACCTTAG TTATGATATG TATGATCCAT ACCATTATTA TCGTACACAG
ATTGTGAAGG GTCAACCCTA TCTGATCATT GGCGGTGAAG ACCATAAAAC AGGGATGGAA
GAAAATACAG AGAAATGTTT TCGCACATTG GAAGCCCATG CGAGAAAACA TTTTAAGATC
AGAGAAGTTG CATATAGATG GTCCTCACAG TATTTCGAAC CAACAGACGG ATTACCTTAC
ATCGGTTATC TTCCGGGTCA TGACGATCAT ATATATGTCG CATCCGGATA TGGCGGTAAT
GGTATGACAT TCGGAACTGT TGCTGCACAA TTACTGAAGT GTATCATTTT GAAGGAAAAT
GCGACGCTGG AAAAACTATT CGACCCTAAC AGGATCAAAC CCGTAGCAGG CTTTACGAAT
TTTGTGACAC ATAACACAGA CGTTGTTAAA GAAATCTTTG GTAAGCTGTT CTCTGCAGAT
GAACTCAGAC AGCTGGGAGA CCTTGCACCA GGAGAAGGAA AGCTGGTCAG TTACCATGAT
AAGAAAGTAG CATTATACAG GGATGATGCC GGCAAATTCT ATGCGCTGAA TCCTACCTGT
ACACACATGG GCTGTGATGT AAAATGGAAC CAGACAGAAA GATCCTGGGA TTGCCCTTGT
CATGGTGCAC GGTACAATTA CGACGGTAAA GTCATTACAG GTCCTGCTGA TGCCGACCTG
GAAGCCCTTG TTTTATCTTC AGAAAATGCA AAAGTGGTAT GA
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| Protein sequence | MIQRDGAQTS LWQGNVPPYI TTSRAERKTV YDVVIVGGGI TGLTTGLLLQ EAGKQCLIVE
ANDLGFGTTG GTTAHLNTLL DTPYYVIAKN FGEDNAKHVA HATAEALNLI RNNVNRFNID
CGYQEADAFL FAQDADQEKE LEKIRQTSAD AGLQIDYIQD IPVNVPFTKA VRAAGQAKFN
PLEYIHGIAK AFEAAGGTIL QQCRVINVTE DDTMKVATTA GVFSSVDVVY ATHIPPGINL
LHLRCAPYRS YAMAVTLEDD AYPEDLSYDM YDPYHYYRTQ IVKGQPYLII GGEDHKTGME
ENTEKCFRTL EAHARKHFKI REVAYRWSSQ YFEPTDGLPY IGYLPGHDDH IYVASGYGGN
GMTFGTVAAQ LLKCIILKEN ATLEKLFDPN RIKPVAGFTN FVTHNTDVVK EIFGKLFSAD
ELRQLGDLAP GEGKLVSYHD KKVALYRDDA GKFYALNPTC THMGCDVKWN QTERSWDCPC
HGARYNYDGK VITGPADADL EALVLSSENA KVV
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