| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5041 |
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| Symbol | |
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| ID | 8361217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6287448 |
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| End bp | 6288428 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967190 |
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| Product | glycosyl transferase family 9 |
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| Protein accession | YP_003124675 |
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| Protein GI | 256424022 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.330457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.05523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAACAG CTATTAAAAA AATTGCCATC TTCCGTGCCT TACAACTGGG AGATATGTTA
TGCAGCGTAC CTGCATTCCG TGCCTTACGC AAGGCTTTCC CGGAAGCGCA CATTACGCTG
CTCGGATTGC CTTGGGCAGC ATCGTTCGTA GAACGGTTTC ATCATTACCT TGATGAATTT
GTACACTTCC CCGGTTATCC CGGTTTACCG GAACAGCCGG TGGTAGCTGC ACAGATTCCT
CCTTTCCTGA CAGCAATGCA GGAAAGGCAG TTTGATCTTG TATTACAGAT GCAGGGAAAC
GGGTCTATTG TCAATCCAAT GGTTGCATTG TTAGGTGGAC GATATACGGC CGGCTACTGG
CGCCGTGAAG ACGGTTGTCC GGATGCCGGC CTTTTTCTTG AATATCCGGA ACAGGTATCA
GAAGTAGAAA GACATCTGCT GCTGATGGAA TACCTGGATA TTCCCCGCCA GGGTACACAA
CTGGAATTCC CTGTTACTGC AAAAGATATG GCAGACTTTA ATCAGCTCTG TCTTCCGCTG
GAAGCGCAGG AATATCTCTG TGTACATCCG GGATCCAGAG GTAGCTGGCG GCAGTGGCCA
CCACATATGT TTGCTTCCAT GGCAGATGAA TTTGCAGAGA AAGGATGGAA AATTGTGCTG
ACAGGCACAA AAGACGAACG GCCATTAACA GAAGCCGTTG CAGAATTAAT GAAACACAAA
TCTATGAATA CTGCAGGCCT CACTACATTG GGTAGCCTGG GTGTATTGAT TAAAAATGCA
CGGGCTTTAT TATCCAACTG TACCGGCGTC TCGCATATGG CCGCTGCATT TGAAACGCCG
AGTGTAATCA TCAGTATGGA TGGAGAGCCT GGCAGATGGG CGCCATTGAA CAAACAACTG
CATTATACAA TAGACTGGAC AACAGCACCT GATTACGATA TAGTGCTAAG GCAGGGTATG
AGGCTTCTCG AGACTACCTG A
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| Protein sequence | MQTAIKKIAI FRALQLGDML CSVPAFRALR KAFPEAHITL LGLPWAASFV ERFHHYLDEF
VHFPGYPGLP EQPVVAAQIP PFLTAMQERQ FDLVLQMQGN GSIVNPMVAL LGGRYTAGYW
RREDGCPDAG LFLEYPEQVS EVERHLLLME YLDIPRQGTQ LEFPVTAKDM ADFNQLCLPL
EAQEYLCVHP GSRGSWRQWP PHMFASMADE FAEKGWKIVL TGTKDERPLT EAVAELMKHK
SMNTAGLTTL GSLGVLIKNA RALLSNCTGV SHMAAAFETP SVIISMDGEP GRWAPLNKQL
HYTIDWTTAP DYDIVLRQGM RLLETT
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