Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5039 |
Symbol | |
ID | 8361215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6284745 |
End bp | 6286463 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644967188 |
Product | Carbamoyltransferase |
Protein accession | YP_003124673 |
Protein GI | 256424020 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2192] Predicted carbamoyl transferase, NodU family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.104774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACTC TTGGAATCAA TGCTGCTTTT CATGACTCCG CAGCATGTCT GGTAAAAGAT GGCCAGCTGA TCGCAGCGGC AGAAGATGAA CGCTTTACGC ATGTCAAACA TGGAAAAAGA CCCATTCCTT TTTCAGCTTA TGAGCTTCCT TATCATGCGA TAGACTATTG TTTAAAAACG GCGAACATTC ATCTCAGCGA TGTTGATCAC ATATCTTATT CTTTCGATCC GTTTATTCTG CTTCCTGAAG AGGACGCAGC AAAAAGTCTG ATCGATATAC CATTGAGACA ACCTTCGCAA TTTGTACCGG AAAAATGGGT CTCTCCATGG GATCCGTTAT TTCTCTCTGC CATTATCAAT GCACCCGGCC AACTGACGGA CGGCTATCCG CATCATTTAC AGCAACGCTT CCGTGGCGCC AGATTTAACG ATGATCAATG GCACTTTGTA GAACATCATT TATGTCATGC TGCCAGTGCA TTTCTGCCTT CACCTTATCA TGAAGCCGCT GTGTTGACAA TTGATGGGCG TGGTGAAAAA GCTACCACTA CGTTCAGCAT GGGTAAAGGA AATGACCTGC AGCGCCTCAG TCAGGTGGAT ATGCCGCATT CGCTCGGATT ATTGTATGAG AAAGTCACAA CTCACCTTGG CTTCCTGCAT TCTTCTGATG AATACAAGGT AATGGCGCTG GCATCATACG GTAAACCGGT TTTCGTCAAT GCATTCCGTT CAATGATCAA TATGCTGGAC AATGGACAGT ATGCTATCCA AGACGAGCGC ATGGTTGAAT TACTTGGCCC TGCAAGGAAA AAAGGTGATG AGTTCACTGC TCATCACTTT AATATCGCGC ATTCATTACA GGCTGTGCTG CAGGAATCCG TACTGCAACT GACTGACTGG CTATACAAAG AAACGCAGGC AGATAATCTT TGTTTTGCAG GCGGAGTTGC CTTAAATTGT GTATTGAATG CAAAGATCAG AGACGCAGGT ATTTTTAAAA ATATCTGGGT ACAACCCGCA TCAGGAGATG CTGGCACAGC GCTCGGTGCT GCTTTATGGA CCGATGCAAA AGAACGTGGC AGCCAGGAAA AAACCTTCCA CATGGATCAT GCTTACTGGG GCCCGGAATA TGGCGATGAC GAGATAAAAG CCTTCCTCGA CTGGACAAAA ACACCTTATA CAAAACTGGA GAATGTAGCG GAAGAAACAG CCGCACTGTT AGCACAGGAT AAAATCATTG GCTGGTATCA GGGACGTATG GAGTTTGGTC CACGTGCATT AGGCAGCCGT TCAATTCTCG CTTCTCCTAT TTCTGCGGAT ATGCAGGCCA GACTAAATGA GGTGAAAGAT CGTGAGGACT TCCGTCCCGT AGCGCCTGTT GTACTGGAAG ACGTCGCTGC TGAGTGGTTT GAAGATGCTC ATTTCTCTCC TTTTATGCTG TTCGTATACA ATGTAAAGGA GGATAAAAAA GATAAAATTC CGGCAGTTAC ACACGTAGAC GGTACTGCCC GCATACAAAC AATTAACCGG GATCAACATC CGCGTTATTA TGATCTCTTA CAGGCTTTTT ACAAACAGAC AGGCGTACCT GTATTGATCA ACACTTCATT TAACACGTTA GGTAAACCCA TCGTATGTAC ACCGCGGGAT GCAGTAGAAT GCTTCTGGTC ATCCCCTTTT GACGCTCTTG TAATAGGTTC TTTTCTTGTT CAGAAATAA
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Protein sequence | MYTLGINAAF HDSAACLVKD GQLIAAAEDE RFTHVKHGKR PIPFSAYELP YHAIDYCLKT ANIHLSDVDH ISYSFDPFIL LPEEDAAKSL IDIPLRQPSQ FVPEKWVSPW DPLFLSAIIN APGQLTDGYP HHLQQRFRGA RFNDDQWHFV EHHLCHAASA FLPSPYHEAA VLTIDGRGEK ATTTFSMGKG NDLQRLSQVD MPHSLGLLYE KVTTHLGFLH SSDEYKVMAL ASYGKPVFVN AFRSMINMLD NGQYAIQDER MVELLGPARK KGDEFTAHHF NIAHSLQAVL QESVLQLTDW LYKETQADNL CFAGGVALNC VLNAKIRDAG IFKNIWVQPA SGDAGTALGA ALWTDAKERG SQEKTFHMDH AYWGPEYGDD EIKAFLDWTK TPYTKLENVA EETAALLAQD KIIGWYQGRM EFGPRALGSR SILASPISAD MQARLNEVKD REDFRPVAPV VLEDVAAEWF EDAHFSPFML FVYNVKEDKK DKIPAVTHVD GTARIQTINR DQHPRYYDLL QAFYKQTGVP VLINTSFNTL GKPIVCTPRD AVECFWSSPF DALVIGSFLV QK
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