Gene Cpin_5037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5037 
Symbol 
ID8361213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6283194 
End bp6284126 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content45% 
IMG OID644967186 
ProductCatalase 
Protein accessionYP_003124671 
Protein GI256424018 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3546] Mn-containing catalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.134226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCATC ACGTAAAAGA TTTACAGTTT AATGTGCGTG TATCGGCACC TGATCCTCGT 
TTTGCAGCCT TATTACTGGA ACAGTTTGGT GGCGCCAACG GTGAACTGAA AGCAGCCATG
CAATACTTTG TTCAGGCTTT TGGCGCAAGA AAACCATATC CCGATAAATA TGACATGTTA
ATGGATATTG CTACGGAAGA ATTCAGTCAC CTGGAGATAG TAGGCGCTAC CATACAGTTA
CTGTTACAAG GGGTAAACGG GGAATTAAAA AATGCGGCAG ATAACTCAGA GATCATGGAG
ACGATGCAGG GCACTGCAAG AAAAGAAGAG TATATTCATC AGGCGATGAT GCATCCCGAG
TTTCTGGTAC ATAGTGGTGG CGGTCCAATG CTTACAAATT GTCAGGGAGT ACCATGGACA
GGTGCATACA TAAATGCGAA CAATGATCTT ACAGTTGACC TGCGTTCCGA TATGGCAGCA
GAGTCAAGAG CTAAAATTAC TTATGAATAT CTGATGAAGT TTACAGACGA TCCTTATGTG
AAGGAAACAC TCACTTTCCT GATGACAAGA GAAATTGCAC ACTTCCAGAT GTTTGAAGCA
GCGCTTGATA CCATACAGCC TAATTTTCCT CCGGCAGTAT TGCAGGGAGA TCCGCGATAC
AGCAACAAGT ATTTTAACAT GTCGGATACA AATAAAGTAC GTGGTCCATG GAATGAAGGT
GTCAGCACGC AGCTGGGTGA AGAATGGCAG TATATTGACA ACCCTGTTGC TTATGTACGG
GAGACGCAGG GCATGACAGG CATTCAGCCG GAAGGTACTA ACCGCACATT GAAGGATGTA
AATGCGCTCG ATCAGCAACT CAGTGAACTC CGAAGTACGG AAGTAAATGC CACTGCTCAA
CCGGGAGAAG CCCAGTGGAG CAACTATAAA TAA
 
Protein sequence
MFHHVKDLQF NVRVSAPDPR FAALLLEQFG GANGELKAAM QYFVQAFGAR KPYPDKYDML 
MDIATEEFSH LEIVGATIQL LLQGVNGELK NAADNSEIME TMQGTARKEE YIHQAMMHPE
FLVHSGGGPM LTNCQGVPWT GAYINANNDL TVDLRSDMAA ESRAKITYEY LMKFTDDPYV
KETLTFLMTR EIAHFQMFEA ALDTIQPNFP PAVLQGDPRY SNKYFNMSDT NKVRGPWNEG
VSTQLGEEWQ YIDNPVAYVR ETQGMTGIQP EGTNRTLKDV NALDQQLSEL RSTEVNATAQ
PGEAQWSNYK