Gene Cpin_5017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5017 
Symbol 
ID8361193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6266295 
End bp6266912 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content49% 
IMG OID644967166 
Productphospholipase/Carboxylesterase 
Protein accessionYP_003124651 
Protein GI256423998 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.122217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0411034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACCA AGAATATAAT AACAGCAGGG AAAAAGACGA CAGAAGCAAA GAAAGCGCTG 
ATCATGATAC ATGGTCGTGG TGGTAGTGCG GAAGACATCC TCACACTGGC CAACTACCTG
AACGTAAAGG ACTATGCGCT GTTAGCCCCG CAGGCTACCG GTCATACATG GTACCCCTAT
TCGTTCCTCA TGCCACCAGC TCAGAATGAA CCATGGCTGT CTTCCGCACT GAGTGTGCTG
AAAGAAGTGG TGGACGATGT AGTGGCAGAC GGTATCGCAG CAGAAAATAT CTATTTCCTC
GGATTCTCCC AGGGCGCCTG TCTGACCCTG GAATTCATCA CCCGTAACGC GGCTAAATAT
GGTGGTACGG TAGCCTTTAC CGGTGGACTG ATCGGCGATC AGCTCTATCC GGAGAACTAC
AGCGGGAATT TCAACGGAAG CCCGGTATTT ATTGGTACCA GTAATCCCGA TCCGCATGTA
CCGGTTGACC GTGTAAAAGC CACAGAGAAA GTGCTGAAGG ACATGGGCGC TGATATTACG
GTCAATGTGT ATAATAACAT GGGACATACC ATCAGTCAGG AAGAGATAAA CTGGGCGAAT
CAACTCGTCT TTAAATAA
 
Protein sequence
MHTKNIITAG KKTTEAKKAL IMIHGRGGSA EDILTLANYL NVKDYALLAP QATGHTWYPY 
SFLMPPAQNE PWLSSALSVL KEVVDDVVAD GIAAENIYFL GFSQGACLTL EFITRNAAKY
GGTVAFTGGL IGDQLYPENY SGNFNGSPVF IGTSNPDPHV PVDRVKATEK VLKDMGADIT
VNVYNNMGHT ISQEEINWAN QLVFK