Gene Cpin_5015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5015 
Symbol 
ID8361191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6265032 
End bp6265964 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content48% 
IMG OID644967164 
ProductGlyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_003124649 
Protein GI256423996 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0314513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0274564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATA GAATATTAGG TCTGCACCAC ATTACAGCGA TTGCTGATAA TGCTAAAAGA 
AACCTTCAGT TTTATACAGA TACACTAGGG GTTCGTTTTG TAAAGAAGAC AGTGAACTTC
GACGATCCCG GTACATATCA CTTCTATTTC GGTGACGAAC ACGGTACTCC CGGCACCATC
CTCACATTCT TCCCATGGGA AGGCATCGGT CGCGGTAACA CCGGTACCGG TATGGCCACA
GAGATCGGTT ATTCCGTTCC AGCAGGCAGC CTTGATTTCT GGGCTGACCG CTTCGCCGCT
AAAAATGTGG TACATGGTCC TGTAGCAGAA AGATTCGGTG AACTGTACCT GCCATTCGAA
GATCCCGATG GACTGAAATT AAACCTGATC GTGCCTAAAA ATGCAGACAA CCGTACTGGT
TGGGAAACGG CGGAAGTAAA AGCGGCCCAC GCCACCAAAG GCTTCCACAG CATCGTACTG
AACCTCAGAA GTATCGGTCC GACAGCTAAT ATCCTGACAG ACGTACTGGG TTATAAATTC
CTGGAACAGG AAGGTAACCG TCACCGTTTC ATTACTGACG CCGTACAGGA AGCTGCTATC
GTAGACCTGA TCGAATCTCC GAAAGAATCT GCCGGTAAAG GCGGTGGCGG TACTAACCAC
CACGTTGCTT TCCGTGTGGC AAATGACGAG GTGCTGATGC AGTTCAGAGA TAAAGTCCTG
AAAAAAGGTC TCAATATCAC CCAGAAAATC AACCGCGATT ATTTCTACTC CCTGTATTTC
AGAGAACCAG GCGGCGTACT GTTTGAACTG GCGACCAACA ACCCCGGTTT TACCGTAGAC
GAACCGCTGG AACAACTGGG ACAAAACCTG AAACTGCCGG TACAGTATGA ATCTATCCGC
GCAGATATCG AAAAAGTATT ACCAGCGCTT TAA
 
Protein sequence
MEDRILGLHH ITAIADNAKR NLQFYTDTLG VRFVKKTVNF DDPGTYHFYF GDEHGTPGTI 
LTFFPWEGIG RGNTGTGMAT EIGYSVPAGS LDFWADRFAA KNVVHGPVAE RFGELYLPFE
DPDGLKLNLI VPKNADNRTG WETAEVKAAH ATKGFHSIVL NLRSIGPTAN ILTDVLGYKF
LEQEGNRHRF ITDAVQEAAI VDLIESPKES AGKGGGGTNH HVAFRVANDE VLMQFRDKVL
KKGLNITQKI NRDYFYSLYF REPGGVLFEL ATNNPGFTVD EPLEQLGQNL KLPVQYESIR
ADIEKVLPAL