| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5003 |
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| Symbol | |
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| ID | 8361179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6255392 |
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| End bp | 6256393 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967152 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124637 |
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| Protein GI | 256423984 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2855] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0262077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0158793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATACAA TCGTGCACAA TGAAGGGGTC AGACAGGAGG GGCTCCCACA TACAGGCAGA
AAGCATTTCC TGGACAGGAG TATTACGACG CGTGAAGTGA TTTTTATACT GGCACTGGCT
GTATGTATGA CACCCTGGAT CTCTGCTCCG GTTGCACTAA TGGGTGGACT GATCATCGCA
CAGTTTATCG GTCATCCATT CCTGCATCTG AATCATAAAG CCACGCATAT ATTGTTGCAG
ATTTCTGTTG TAGGACTTGG TTTCGGGATG AATATACACA GTGCGCTGAA AGCGGGTAGT
GAAGGTTTTA TATTTACCAT TGCCTCTATT ACGGGTACAT TGCTGATCGG TTATGTGACC
GGAAAGTTGT TGAAAATAGA TAGCAAGACT TCTCACCTGA TATCCTGTGG AACTGCCATC
TGTGGTGGTA GTGCCATTGC CGCAGTATCT CCGGTGATTA AGGCGGAAGA GAAACAACTC
TCTGTTGCAC TGGGCACTGT ATTTATCCTC AATTCCGCGG CCTTGTTCCT GTTTCCTTTT
GTCGGTCATC TCTTACATCT TTCACAGAAT CAGTTTGGCT TATGGAGTGC GATTGCCATC
CATGATACCA GTTCAGTAGT AGGTGCAGCC GGTAAGTACG GTCCGCAGGC ATTAGAAGTA
GCGACTACCG TTAAGCTGGC CCGTGCTCTC TGGATCATTC CTGTGACCCT GCTGACAGCC
ATCTGTTTTA AAACAGGTAA GCAGAAAATG AAGATCCCTT ATTTCATCGG CTTGTTTATT
CTCGCGATGC TGGCACATAC CTATTTCCCT ATGGAAGCAG CGGGTGAGGT GGTGGTCCGC
GTAGCGAAAA CAGGTCTTAC CATCACCTTA TTCCTGATCG GAGCAGGACT CTCCCGGGAT
GTACTGAAAG GGGTTGGTGT GAAGCCGCTT ATGCAAGGAG TATTCCTCTG GGTATTGATC
TCCGGCGCGG CTTTGTGGGC GGTGATGACA CTTGCAGCCT AA
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| Protein sequence | MNTIVHNEGV RQEGLPHTGR KHFLDRSITT REVIFILALA VCMTPWISAP VALMGGLIIA
QFIGHPFLHL NHKATHILLQ ISVVGLGFGM NIHSALKAGS EGFIFTIASI TGTLLIGYVT
GKLLKIDSKT SHLISCGTAI CGGSAIAAVS PVIKAEEKQL SVALGTVFIL NSAALFLFPF
VGHLLHLSQN QFGLWSAIAI HDTSSVVGAA GKYGPQALEV ATTVKLARAL WIIPVTLLTA
ICFKTGKQKM KIPYFIGLFI LAMLAHTYFP MEAAGEVVVR VAKTGLTITL FLIGAGLSRD
VLKGVGVKPL MQGVFLWVLI SGAALWAVMT LAA
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