Gene Cpin_4999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4999 
Symbol 
ID8361175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6251469 
End bp6251867 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content45% 
IMG OID644967148 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003124633 
Protein GI256423980 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.138614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0407837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGGA AAACACAGAC ATCAGAGAAG TCTGAAACTT GTACGGAGCA TCTCCGTGCC 
ATCCACGATA CGATGGACGT GCTGAATGGT AAGTGGAAGA TCGCTATTAT CGGGTCTTTA
CGTTTTGGAA AACGCCGCTT TATGGAACTG CAGAGGGAAG TAGAGGGAGT GGGTTCTAAA
ATGCTCTCCA AGGAGTTGCG GGAGCTGGAA ATGAATGAGC TGGTGAGAAG AACGGTTTAC
GATACCAAAC CTGTCACTGT GGAGTATGAA CTGACTGATT ATGGTAAAAC CCTGGAAAGC
ATCATTGACG AAATGGCGAA ATGGGGTCAT TCTCACCGTA AAAGGATTAT GCATCCCGTA
AATCAGTTAG ACCTACAGGA TGCACTAAGC CATCTTTAA
 
Protein sequence
MNRKTQTSEK SETCTEHLRA IHDTMDVLNG KWKIAIIGSL RFGKRRFMEL QREVEGVGSK 
MLSKELRELE MNELVRRTVY DTKPVTVEYE LTDYGKTLES IIDEMAKWGH SHRKRIMHPV
NQLDLQDALS HL