Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4999 |
Symbol | |
ID | 8361175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6251469 |
End bp | 6251867 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644967148 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003124633 |
Protein GI | 256423980 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.138614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0407837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGGA AAACACAGAC ATCAGAGAAG TCTGAAACTT GTACGGAGCA TCTCCGTGCC ATCCACGATA CGATGGACGT GCTGAATGGT AAGTGGAAGA TCGCTATTAT CGGGTCTTTA CGTTTTGGAA AACGCCGCTT TATGGAACTG CAGAGGGAAG TAGAGGGAGT GGGTTCTAAA ATGCTCTCCA AGGAGTTGCG GGAGCTGGAA ATGAATGAGC TGGTGAGAAG AACGGTTTAC GATACCAAAC CTGTCACTGT GGAGTATGAA CTGACTGATT ATGGTAAAAC CCTGGAAAGC ATCATTGACG AAATGGCGAA ATGGGGTCAT TCTCACCGTA AAAGGATTAT GCATCCCGTA AATCAGTTAG ACCTACAGGA TGCACTAAGC CATCTTTAA
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Protein sequence | MNRKTQTSEK SETCTEHLRA IHDTMDVLNG KWKIAIIGSL RFGKRRFMEL QREVEGVGSK MLSKELRELE MNELVRRTVY DTKPVTVEYE LTDYGKTLES IIDEMAKWGH SHRKRIMHPV NQLDLQDALS HL
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