| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4998 |
|---|
| Symbol | |
|---|
| ID | 8361174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 6250167 |
|---|
| End bp | 6251465 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644967147 |
|---|
| Product | acetyl-CoA hydrolase/transferase |
|---|
| Protein accession | YP_003124632 |
|---|
| Protein GI | 256423979 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0427] Acetyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.410029 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0205642 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACA TTTCATATAT CACCGCGGCG GAAGCCGTAA AGTGCGTTGA GTCTGGTAAT
CGTGTATTTA TTCATGGTAG CGCAGCTACA CCCGTTCACC TGCTCAGGGC ATTACAGAAC
AGGCACGCCG ACCTCAGTGA TGTAGAACTC GTCAGCATCA CCACACTGGG AGATGTTGAC
TTCGACAACC CGCTATACCG TAAAAGTTTT TATGTCAATT CATTGTTTGT TTCCGCCGCC
AACCGCTCCG TCGTAAACAG TGACGACGGC GACTATGTAC CCATCTTCCT CAGTCAGATA
CCACAGCTGT TCAGAGATAA TATCTTACCA CCGGATGTGG CTATCGTACA GGTATCCCCT
CCCGATGCGC ACGGATACTG TTCCCTTGGT ACTTCTGTGG ATATTGCCAG AGCAGCGATC
GACGTCGCTA AATATGTGAT TGCACAGGTC AATCCCATGA TGCCGCGTAC ACATGGCGAA
GCCTTCATAC ACTTCTCCCG CTTTCATGCG GCGGTATGGC AAAAAGCCGC ATTGCCGGAA
GTAGATTACT CTCAGCAAGC CACAGCAGTA ACAGAACAGA TCGGCCGTAA TATCGCCGAA
CTGGTGGAAG ATGGGGCGAC ATTGCAATTA GGTATCGGTA ATATTCCTGA CCAGGTGCTG
AAGAACCTCA CGCAACACAA GAACCTGGGA CTACACACCG AGATGTTGTC AGATGGGGTG
ATTCCGCTGA TTGAAAATGG CGTGATCAAT AACAGTCTGA AAAAACTGAA CAGGGGCAGA
TCAGTGACCG CATTTATGGC GGGCACACGA AAATTATACG ACTTCGTCAA TGACAATCCT
GCCCTTAGGG TCATGGATAT CAGCTATGTG AATGATACGA GCATTATCCG TCAGAATCCT
AAAGTGACGG CTATAAATAG TGCGATCGAA ATAGACCTGA CCGGCCAGGT ATGCGCGGAT
TCTATTGGTA CTTATCAGTA TTCCGGTATC GGCGGACAAA TGGACTTTAT GCGGGGCGCT
TCCCTCTCAG AGGGTGGTAA ACCCATCATC GCATTGCCGT CCGTAACCAG TAAAGGCATC
TCCCGCATTA CCCCCTTCCT GAAAGAAGGC GCAGGTGTAG TGACGACCCG TGGACATATG
CACTGGGTGA TCACCGAATA CGGCAGAACC AATCTGTTTG GGAAAAGTCT TAAACAACGT
GCAAAAGCAC TGATAGAGAT CGCCCACCCA GACCACCGGG AGGCGCTGGA AAAAGCATAT
TTCGATCGCT TCGTAAAGAA AGTTTCAGTT TTAGGTTGA
|
|---|
| Protein sequence | MSDISYITAA EAVKCVESGN RVFIHGSAAT PVHLLRALQN RHADLSDVEL VSITTLGDVD
FDNPLYRKSF YVNSLFVSAA NRSVVNSDDG DYVPIFLSQI PQLFRDNILP PDVAIVQVSP
PDAHGYCSLG TSVDIARAAI DVAKYVIAQV NPMMPRTHGE AFIHFSRFHA AVWQKAALPE
VDYSQQATAV TEQIGRNIAE LVEDGATLQL GIGNIPDQVL KNLTQHKNLG LHTEMLSDGV
IPLIENGVIN NSLKKLNRGR SVTAFMAGTR KLYDFVNDNP ALRVMDISYV NDTSIIRQNP
KVTAINSAIE IDLTGQVCAD SIGTYQYSGI GGQMDFMRGA SLSEGGKPII ALPSVTSKGI
SRITPFLKEG AGVVTTRGHM HWVITEYGRT NLFGKSLKQR AKALIEIAHP DHREALEKAY
FDRFVKKVSV LG
|
|---|
| |