Gene Cpin_4985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4985 
Symbol 
ID8361161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6234835 
End bp6235353 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content45% 
IMG OID644967134 
ProductActivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_003124619 
Protein GI256423966 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5580] Activator of HSP90 ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.445851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCCG ATCAATTAAA GAGGCCATCT ATAAGCATCC TGCCGCTGTT ATTAACGATT 
TCTCCCTGGA TATATACTGA AGACTTTCCC GCTTACTATC AAGTAAATTA TAGCTGTTTA
TTCCCTACCT TCGCGCCCAT GAAAGACTAC AAAAAACACT TCATCATCCC GGCGCCGCCG
GAAGACCTCT ATAAAGCGCT CACCAATCCG GTTACTATTC AACTCTGGAC GGGCGAGCCT
GCGGAAATGT CTACCGAGCC TGGTACGGAA TTCTCCCTCT GGGGCGATAG TATTGTAGGG
ATGAACCTGG AATTTGAAGA AGATAAGAAA ATTGTGCAGG AGTGGTATTT CGGTGAACAG
GAAGATGCGT CTATTGTGAC GATCATCCTG CATCCGAACA AAAAAGGCAC CGACGTTGAA
CTCAGGCATA CCAATATACC AGACGAAGCT TACGAAGACA TCGTAGGTGG ATGGAATGAG
ACTTACTTTG GCGCACTGAT TGACTTTTAT ACTGAATAG
 
Protein sequence
MLPDQLKRPS ISILPLLLTI SPWIYTEDFP AYYQVNYSCL FPTFAPMKDY KKHFIIPAPP 
EDLYKALTNP VTIQLWTGEP AEMSTEPGTE FSLWGDSIVG MNLEFEEDKK IVQEWYFGEQ
EDASIVTIIL HPNKKGTDVE LRHTNIPDEA YEDIVGGWNE TYFGALIDFY TE