| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4979 |
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| Symbol | |
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| ID | 8361155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6227680 |
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| End bp | 6231936 |
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| Gene Length | 4257 bp |
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| Protein Length | 1418 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967128 |
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| Product | Carbohydrate-binding family 9 |
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| Protein accession | YP_003124613 |
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| Protein GI | 256423960 |
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| COG category | [N] Cell motility |
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| COG ID | [COG5492] Bacterial surface proteins containing Ig-like domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.502529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAC CCGTTTCTTT TCCCTCGAAA GCGGAACATT CCGCGTCAAT TACGCAGGCT
GGTCCTGCCC GGCTCAGGTA CCTGAGGAAA ATTCCTTGCT GGTACCGTAC GATATGCTTT
TTACTGTTAC TGATGCAAAG TAGCGTACTG CTGGCGCAAA GCGATGGCTT ACCTCGCGGC
GCATACCAGA TGCCTTACAC CCGTTATGAA GCAGAAAATG CAGCCTTAGA CGGAGGTGCA
GCCCTGGAGC AATCACCTCA GTTCATTCAG ACACAAATCG CCTCCGAAGC ATCTGACCAG
AAGTATGTCA GTCTCGCTAC AAATGGCGCA GGTGTTGAAT GGACCCTTAC GCAGCCCGCA
CAAGGGGTGA ACCTGCGTTT CACCATGCCT GATGACAATA CAGGCGCAGG CCGTACCGGT
AGCCTCGGTT TGTATGTCAA TGGCGTTAAA GTACGTACGA TCAACCTTTC CTCCTACTGG
GCCTACCAGT ACTTCCCGGC TGCCGACCCA GTGCAGACGC CCGGAGGAAA AACCTTCATG
CGTTTTGATG AAGTCCATTT CCGGCTCGAT GCGCCCATGA ATGCAGGCGA CAAACTCAGC
ATCCGCAAAG ACAACAACGA CGCCATTACT TATGGTATCG ACTTTGTGGA AGTAGAAGCT
GTCCCTGCAG CCTTGCCGCT ACCAGCCAAT TTCCTGTCTG TTGCAGATTA TGGCGCTACC
GCCAACGACC AGACAGACGA CTTTGCGGCG TTCAATACCT GTATCGCCGC AGCGGCTTCA
CAGGGTAAAC ACGTGTATAT CCCGGCAGGT CGTTTCCTGT TGAGCGATAA ACTGGCCCTG
AATGTCAGCA ACATGAAAAT CCAGGGCGCA GGCATCTGGT ACACAGACGT TAATTTCTCC
ACCGACAAAC AATTTTATGG CGGCTTTATG GGCCGTGCCA GCAATGTAGA GATCTCTAAT
TTTACACTCA GTACAATCAA CAATGACCGG CTGAAATACG ACGAATCCAA TCCGAGACTC
CCTGGTGAAA TGTACAAAAC CTATAAAGGT TTTATGGGTA CTTATGGCAC CGGCTCCCGT
ATACACGATA TATGGGTGGA GCACTTCGAA TGCGGTTTCT GGATAGCTGG TTACGATCCC
CCTTATCCGA TCGACATCAC TAACAACCTG GTTATTTCCA GATGTCGTAT CCGCAACAAC
TATGCAGACG GTGTAAACTT CTGTCAGGGT ACTTCGAACT CCGTAGTGGA ACAATCCAGC
GTACGGAATA ACGGTGATGA TGGTCTGGCC GTATGGCCTG CCAACGCAGC AGGCAATAAC
GCTACCTGTC GTAACAACAT CTTCCGGTAC AATACCATCG AAAACAACTG GCGCGCAGGC
AGTATCGCCC TGTTCGGCGG TACCGGACAT GAGATCCATC ACAACCTGAT CAAAGACGGC
GTGGGCGGTT CCGCAATCCG TTTTACCAAC GACTTCCCCG GCTTTACGTT TGAATATCCT
GGTGATCTTA TCAAAGTATA TGAAAACACC ATGATCGGTT GTGGCACGAG CTATGACCTG
TGGGACCAGA AAAGAGGTGC GATCGAATTC TATGCAGGCG GTACCGGTAT TTTCAACATG
CAATTTGACA ACAATACCAT TCTGCGCTCG CAACGCGACG GTATCCAGAT CTACGGCAAT
AATCTGCATC ACCTCGTATT CAATAACACC ACCATCGACG GTACCGGCCT CGATCCTGTT
GTAAGAGATG TGCCTTCTGA CGTATACGGC GGTTTCGGAC TATATGTCCA GGCAGGATCG
CAGACGGCCA CATTCAACAA CCTGACAGTC ACCAATGCTG AATCAGGCGC GTACCTTAAC
CGGAATAACA GCTTCCAGCT GATCATCCAG AACATCAACA TTCCCGTATC AGGCGTGAAT
ATCAAACCGG CGAATGATAC CACCCTCACA GAAGGCCAGG TATTGCAGCT GTCAGCTGAT
ATCATCCCTG CTGATGCGAC CAACAAAAAC GTCACCTGGA ATAGTTCTAA TCCTTCTGTA
GCAACAGTAG ACGCCAGCGG TAAAGTGACC ACTGTAGGTA TCGGTACAGC CAATATCACT
GTGACTACGG CCAGCGGTAA TTTCACCGCT ACGCGTAAAG TAACAATACT ACCCGGCGTG
AATATCACTG CGACTTTACC GAATGCAGCT GAAGGCGGCG CAGCAGGCAG ATTTACAGTC
AGCACCTCTT CCCTGTCACA AAGCATTAAT GTGAAATATG CGGTATCCGG TACCGCCAGC
GCCAATGATT ACAATGCCAA CCCTCCACTG AGTGGCACAA TCACACTAAC GCCGGCACAA
CCATCCGCAG TCATCAACAT TACAACAGTG GATGACGCCG TGTTTGAAGG TCCGGAAACA
TTACGCCTGA CCTTAAAACC GGATGCTTCC TATAAACTGG GCGGTGATAC CATCGCCACC
ATTACGATTG CCGATAACGA TAATCCTCCT TGCATATCAC CTGTCATCGC ACAGGTATCC
GGTACGGCCC CTGTCATTGA CAATACAATC GATGCAGCAT GGTCTATTGC TCCGGTGAGG
AATATCAGCA ATGTCATATT AGGTGGACTA CCTTCCGATT ATGCTGGTAA ATGGAGAGCC
ATGTATGATA ATACCAACCT CTATCTGTTG ATAGAAGTCA ATGATGCAAC CCGCATTTCC
GACTCTGGCG CCAGCTGGTG GGAAGATGAT GTTGTAGAAA TATTCCTGGA CGGCGACAAC
AGTAAAGGAA GTGCCTACGA TGGAGCAAAC GACTTCCAGC TGGGCTTCCG TTGGAATGAC
AATGTAGTAC ACACCGGCTC CAATTCTGCA ACGAGAACAA CAGGTATCAA CTTCAGACAA
TATACCACTG CAACCGGTTA TAACCTGGAA GTGGCTATTC CGTGGACAAC CATCGGAACA
ACACCAGCTG TAGGTAAACC TATCGGACTC GACATACAGA TCGACGATGA TGATAACAAT
GGTACACGGG ATGCGCAGAT CGCTTCTTTT GCCACGAATA CCACGGCATT CTCCAATCCT
TCCGTATTTG GTACCGTATA CCTCACCACC TGCAGCGGTC CGCAGAATCA GCCGCCTGTG
GTAAATGCCG GCGCAGACAT TACATTGGCG GCTAATACCA CAACGGTTAC TTTACAGGGT
ACAGGCTCAG ATCCTGAAGG GAATGCAGTG ACCTACAGCT GGACAAAAGT AAGCGGTCCT
GCCGCTACGA TCAGCAATAC AGCCATTGCC AATCCTGTTA TCAGCGGTCT GACAAACGGC
AGCACTTATG TGTTCCAGTT GACCGTAAAT GATGGTACAT CGTCTTCCAG CGACCAGGTA
CAGGTGATAG TAGGCTCAGT CATTGATCCG AATCAACCGG GTACTATACA GGCAAGTCCT
GCTGCCGGTA CGATCACCGT AAATGGTAAT CTGAATGAAA GCAGCTGGAA TCTATCACAG
TCGATCAGCA AGGTAACCAC CGGTTCGCCT AACAACACAG CCACCTTCGG CGTACTCTGG
GATGCAAACA ACCTGTATAT CGGTGTAAAA GTGCTGGACG GCTCCCTCTA TGCAGATTCT
CCTGATCCAT GGGATAATGA TGCCGTTGAA ATCTTCATCG ACGCCAACAA CAATAAAGGA
AGCACTTTTG ACGGACGCGA TAACCAGTTC ATCAAAGCAT ACAACAGCAG TTCCCTGTTC
AGTAAAACAG CTGTAACAGG CATACAACAC GCCTATGCTG CTATCACCGG CGGATACACC
ATAGAGATGA GTATTCCGTG GTCACAGTTG AATATTACGC CTGCTGCAGG CGTATCCTTC
GGTTTTGACG CAGCGTATGA CGATGATGAT AATGGCGGAG CGCGTGACGG TCAGGCAGTA
TGGTTTGGTT CCTTATTCAA CTATGAAAAT ACTTCAGGAT ATGGTACGGT GATACTGGCC
AACAGTTCAC CGGCAGCCGT AGCGGCAGCA GTCGCCAATG AAGTTATTGC AAAGCTGAAA
GAACCTGCTA TACAGATCTT ACCTAACCCT GCTACGGATG GTCAGGCCAA AGTGATCATC
TCCAACTACA GCGGTCAGGG ACACCTGTTT GTCTATGATC TGAGCGGCAG ACAGGTATAT
GCGGCCAAAG CACAGCCGGA AGTAAGATTG AACCTTCCGC AGTTGCCCAA AGGCGTATAC
GTTGTAAAAT TCACCTATGG TGAAAAAGCA ATTACGAAAA AACTATTGAT ACAATAA
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| Protein sequence | MRKPVSFPSK AEHSASITQA GPARLRYLRK IPCWYRTICF LLLLMQSSVL LAQSDGLPRG
AYQMPYTRYE AENAALDGGA ALEQSPQFIQ TQIASEASDQ KYVSLATNGA GVEWTLTQPA
QGVNLRFTMP DDNTGAGRTG SLGLYVNGVK VRTINLSSYW AYQYFPAADP VQTPGGKTFM
RFDEVHFRLD APMNAGDKLS IRKDNNDAIT YGIDFVEVEA VPAALPLPAN FLSVADYGAT
ANDQTDDFAA FNTCIAAAAS QGKHVYIPAG RFLLSDKLAL NVSNMKIQGA GIWYTDVNFS
TDKQFYGGFM GRASNVEISN FTLSTINNDR LKYDESNPRL PGEMYKTYKG FMGTYGTGSR
IHDIWVEHFE CGFWIAGYDP PYPIDITNNL VISRCRIRNN YADGVNFCQG TSNSVVEQSS
VRNNGDDGLA VWPANAAGNN ATCRNNIFRY NTIENNWRAG SIALFGGTGH EIHHNLIKDG
VGGSAIRFTN DFPGFTFEYP GDLIKVYENT MIGCGTSYDL WDQKRGAIEF YAGGTGIFNM
QFDNNTILRS QRDGIQIYGN NLHHLVFNNT TIDGTGLDPV VRDVPSDVYG GFGLYVQAGS
QTATFNNLTV TNAESGAYLN RNNSFQLIIQ NINIPVSGVN IKPANDTTLT EGQVLQLSAD
IIPADATNKN VTWNSSNPSV ATVDASGKVT TVGIGTANIT VTTASGNFTA TRKVTILPGV
NITATLPNAA EGGAAGRFTV STSSLSQSIN VKYAVSGTAS ANDYNANPPL SGTITLTPAQ
PSAVINITTV DDAVFEGPET LRLTLKPDAS YKLGGDTIAT ITIADNDNPP CISPVIAQVS
GTAPVIDNTI DAAWSIAPVR NISNVILGGL PSDYAGKWRA MYDNTNLYLL IEVNDATRIS
DSGASWWEDD VVEIFLDGDN SKGSAYDGAN DFQLGFRWND NVVHTGSNSA TRTTGINFRQ
YTTATGYNLE VAIPWTTIGT TPAVGKPIGL DIQIDDDDNN GTRDAQIASF ATNTTAFSNP
SVFGTVYLTT CSGPQNQPPV VNAGADITLA ANTTTVTLQG TGSDPEGNAV TYSWTKVSGP
AATISNTAIA NPVISGLTNG STYVFQLTVN DGTSSSSDQV QVIVGSVIDP NQPGTIQASP
AAGTITVNGN LNESSWNLSQ SISKVTTGSP NNTATFGVLW DANNLYIGVK VLDGSLYADS
PDPWDNDAVE IFIDANNNKG STFDGRDNQF IKAYNSSSLF SKTAVTGIQH AYAAITGGYT
IEMSIPWSQL NITPAAGVSF GFDAAYDDDD NGGARDGQAV WFGSLFNYEN TSGYGTVILA
NSSPAAVAAA VANEVIAKLK EPAIQILPNP ATDGQAKVII SNYSGQGHLF VYDLSGRQVY
AAKAQPEVRL NLPQLPKGVY VVKFTYGEKA ITKKLLIQ
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