Gene Cpin_4976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4976 
Symbol 
ID8361152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6225424 
End bp6226188 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content45% 
IMG OID644967125 
Producthypothetical protein 
Protein accessionYP_003124610 
Protein GI256423957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.266291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC AAACCTCGCT GATCACCTTC ACCGGCAAAC TCGGTAACAT GATTGGCTAT 
CAAAGAAAGA ACCATTACTT CCTGCGTAGT GCACCGGATA CAGTCCGGCA AACGGAAAAT
ACCCGGCGTG CAGCGAAACG CTTCGGCTCC GCAAGTAAAA AAGGCGCGCT CATCCGTCAC
GCTTTTTGTG GGCAAATGGA GGGGGATATA GACGGAACAC ACGTCAACCG TCTTACTAAG
GCATTCATCA TGAATGGGAG AAATCATGAG GCTGCACTCA AGGGTTTCCG CTTCAATCAG
TATACGGGCA TTGACCACTT CTTTTCAATA GCGCCTGCAT GTTCACCGGA AGGAGTCGTA
CATATTCCTG CACAGCTACT GCCGGTGATT AAAGGCAGCA CAGCGCTTGA AGTAAAAGTG
ATCACTGCTA CCGTCAGCTT CGGTACACAG CGTATTATAC ATACTAATAT ACATATTCTG
ACGCTGAATC CCGGTGAATA TTTTGCAGGT GCATTCTTTA AGATAGACCA GAGTAGTACA
GGTATATCAG TGGTAACAAT ACAAGTGAGA GCGCTTCGGG AGGGAATACC TTCCTACAGT
AAAAAACACA TGGCTGCGGA TATTATCGCA GTGATCACAC CTGAAAGAGA GTATACTTCT
GATAAAGCTG CTTATGTACA ACAGCACTTT TCACATAACT TATCTGAGGT TCATTTTACG
AATGCTCATT TGCATCAGTC ACCTGTATTT ATTCAAAGAG AATAG
 
Protein sequence
MAKQTSLITF TGKLGNMIGY QRKNHYFLRS APDTVRQTEN TRRAAKRFGS ASKKGALIRH 
AFCGQMEGDI DGTHVNRLTK AFIMNGRNHE AALKGFRFNQ YTGIDHFFSI APACSPEGVV
HIPAQLLPVI KGSTALEVKV ITATVSFGTQ RIIHTNIHIL TLNPGEYFAG AFFKIDQSST
GISVVTIQVR ALREGIPSYS KKHMAADIIA VITPEREYTS DKAAYVQQHF SHNLSEVHFT
NAHLHQSPVF IQRE