Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4976 |
Symbol | |
ID | 8361152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6225424 |
End bp | 6226188 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644967125 |
Product | hypothetical protein |
Protein accession | YP_003124610 |
Protein GI | 256423957 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.266291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAAAC AAACCTCGCT GATCACCTTC ACCGGCAAAC TCGGTAACAT GATTGGCTAT CAAAGAAAGA ACCATTACTT CCTGCGTAGT GCACCGGATA CAGTCCGGCA AACGGAAAAT ACCCGGCGTG CAGCGAAACG CTTCGGCTCC GCAAGTAAAA AAGGCGCGCT CATCCGTCAC GCTTTTTGTG GGCAAATGGA GGGGGATATA GACGGAACAC ACGTCAACCG TCTTACTAAG GCATTCATCA TGAATGGGAG AAATCATGAG GCTGCACTCA AGGGTTTCCG CTTCAATCAG TATACGGGCA TTGACCACTT CTTTTCAATA GCGCCTGCAT GTTCACCGGA AGGAGTCGTA CATATTCCTG CACAGCTACT GCCGGTGATT AAAGGCAGCA CAGCGCTTGA AGTAAAAGTG ATCACTGCTA CCGTCAGCTT CGGTACACAG CGTATTATAC ATACTAATAT ACATATTCTG ACGCTGAATC CCGGTGAATA TTTTGCAGGT GCATTCTTTA AGATAGACCA GAGTAGTACA GGTATATCAG TGGTAACAAT ACAAGTGAGA GCGCTTCGGG AGGGAATACC TTCCTACAGT AAAAAACACA TGGCTGCGGA TATTATCGCA GTGATCACAC CTGAAAGAGA GTATACTTCT GATAAAGCTG CTTATGTACA ACAGCACTTT TCACATAACT TATCTGAGGT TCATTTTACG AATGCTCATT TGCATCAGTC ACCTGTATTT ATTCAAAGAG AATAG
|
Protein sequence | MAKQTSLITF TGKLGNMIGY QRKNHYFLRS APDTVRQTEN TRRAAKRFGS ASKKGALIRH AFCGQMEGDI DGTHVNRLTK AFIMNGRNHE AALKGFRFNQ YTGIDHFFSI APACSPEGVV HIPAQLLPVI KGSTALEVKV ITATVSFGTQ RIIHTNIHIL TLNPGEYFAG AFFKIDQSST GISVVTIQVR ALREGIPSYS KKHMAADIIA VITPEREYTS DKAAYVQQHF SHNLSEVHFT NAHLHQSPVF IQRE
|
| |