Gene Cpin_4961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4961 
Symbol 
ID8361137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6206896 
End bp6208278 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content47% 
IMG OID644967110 
Productmercuric reductase 
Protein accessionYP_003124595 
Protein GI256423942 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.184484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.142844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAT TTGATGCAAT TGTCATTGGC TCCGGCCAAG GTGGTGTTCC TTTGGCTAAA 
AAGCTGGCTA AAGCCGGCTG GCAGACAGCC ATCGTAGAGA AAAGATGGAT CGGCGGTACC
TGTATCAATG ACGGCTGTAC GCCAACCAAA TCAATGATTG CCTGCGGCGC TGCTGCCCAT
GTCATTGCAA ACAGTCAGGA ATGGGGTATC ACCGTCAGCG ATTTTAAAGT AGATCTTGAA
AAGATTGTCC AGCGAAAAAA CAAAGTAGTG GAATCCTTCC GTGGAGGTGC TACCAAGGGA
ATGGAAAAAA CAGAAGGTTT GTCCATTATA TACGGAGAAG CCGTATTCAC CGGGGAGAAA
ACACTGAATG TGATCCTGAA GGATGGCGGA GAAGAAGCAA TCACCGCCCC CCACATATTC
ATCAATACCG GTACCCTTCC CAAAATCCCC CCTGTTCCCG GTCTCGATAC GATAAAATAC
CTGACCAATA CCAGCATCAT GGAGCTCACC AAACTGCCCT CCCATCTCGT GATCATGGGC
AGCGGATATA TCGGCCTGGA ATTCGGTCAG TTATTCCGCA GATTGGGGAG TCAGGTAACG
ATTATTGATA GAGGCAAACA ACTCTTAAAG CATGAAGATG AAGATGTTGC AGCCGCGGTA
AAAAAAGTAA TGGAAACTTC CGGCGTCACC ATGCATACCG GTGCAAATGT GCAGAAAGTA
GAACAGATCG GCGATACCAT CCGACTGCAG TTCACCGCCA ACGGAGAAAA CCTTACCATC
ACCGGCTCTC ACCTGCTCGT AGCCATCGGA CGTACCCCAC AATCTACCTC TCTGCAGCCT
GAAAAAGCAG GACTTGCATT AGATGACAAA GGTTACTTTA AAGTGAACGA TCAGCTGGAA
ACCAATGTAT CGGGTATCTA TGTATTGGGC GACGTAAAAG GCGGTCCCGA ATTCACCCAC
ATTTCATACA ACGATTACCT CGTTTTGTAC AAGAGATTGG TCAATAAAGA AGATACATCT
ATTAAAGATA GACCCGTACC TTACTGCATG TTTACCGACC CTCAGTTAGG ACGTATCGGA
CTGACTGAAA AAGCGGCAAA AGAAGCAGGA TACGATGTGA AAGTTGCCTG CCTCGATATG
ACGCGGGTAG CCAGGGCCAT AGAGACAGGT AACACACAGG GATTTATGAA AGCTGTTATT
AATGCTAACG ACGATAAATT ACTGGGAGTT GCTATCTTGG GCCCCGAAGG AGGGGAAGTG
ATGTCGGTAA TGCAGATGGC AATGCTCGGA GGTATCACAG CTAAACAACT GAGAGAAATG
ATATTCGCGC ATCCACTGTA CTCAGAATCA ATTAATAACC TCTTTATGAC ATTGGAAAAA
TAA
 
Protein sequence
MRKFDAIVIG SGQGGVPLAK KLAKAGWQTA IVEKRWIGGT CINDGCTPTK SMIACGAAAH 
VIANSQEWGI TVSDFKVDLE KIVQRKNKVV ESFRGGATKG MEKTEGLSII YGEAVFTGEK
TLNVILKDGG EEAITAPHIF INTGTLPKIP PVPGLDTIKY LTNTSIMELT KLPSHLVIMG
SGYIGLEFGQ LFRRLGSQVT IIDRGKQLLK HEDEDVAAAV KKVMETSGVT MHTGANVQKV
EQIGDTIRLQ FTANGENLTI TGSHLLVAIG RTPQSTSLQP EKAGLALDDK GYFKVNDQLE
TNVSGIYVLG DVKGGPEFTH ISYNDYLVLY KRLVNKEDTS IKDRPVPYCM FTDPQLGRIG
LTEKAAKEAG YDVKVACLDM TRVARAIETG NTQGFMKAVI NANDDKLLGV AILGPEGGEV
MSVMQMAMLG GITAKQLREM IFAHPLYSES INNLFMTLEK