Gene Cpin_4947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4947 
Symbol 
ID8361123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6185657 
End bp6186199 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content45% 
IMG OID644967096 
Producthypothetical protein 
Protein accessionYP_003124581 
Protein GI256423928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.420376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.515544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAGA CCTTGTACAC CGCTGGGCTT TTCATGGCAG CTACCTGTAT GTTTGCAGGT 
AAAGCCAAGG CGCAGTTGAA AGGTTTCAGT ATTGGTCCTT ATGCTGAAAT CGGCACCCCA
GTGGGTGATT TTAAGGACAC ACATAACGCT GGTTTTGGTG GTGGTTTGAA TGCTGATATT
AAGCTGATCG CAGGATTTGG TGTAACTGGC TCTGCTGGTT TCATGTATTT CTCCGGAAAA
AGCTATGATA TCTTTGATAT TGAGGGTAAC CGGGTTACTG TAAAAGCAGA ATCTATTAAG
GCGCTGCCGG TAAGAGTTGG TCTGAAGTAC AAATTCGGTT TTCCGTTATT GTATGTGAAG
GCTGAAGGCG GTAGTGCTAC ATTCGTAGGT GGCGATTCAG ATGCGTACAA AGGTACGGCT
GCTATCTTCG CTCCGGGTAT TGGTATCCGT GTACTGGGCC TGGATGTGGA AGGAAAATAT
GAGATGTGGT TTAAAGACGG AACCAGTGGT TTCTTTGGTC TGAAAGCCAG CTATCATTTC
TAA
 
Protein sequence
MLKTLYTAGL FMAATCMFAG KAKAQLKGFS IGPYAEIGTP VGDFKDTHNA GFGGGLNADI 
KLIAGFGVTG SAGFMYFSGK SYDIFDIEGN RVTVKAESIK ALPVRVGLKY KFGFPLLYVK
AEGGSATFVG GDSDAYKGTA AIFAPGIGIR VLGLDVEGKY EMWFKDGTSG FFGLKASYHF