| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4945 |
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| Symbol | |
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| ID | 8361121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6182401 |
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| End bp | 6184383 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967094 |
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| Product | alpha-L-arabinofuranosidase domain protein |
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| Protein accession | YP_003124579 |
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| Protein GI | 256423926 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.142964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.295957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA TAATCACATT TGTCGCCACA GCATTTTTGC TGCTGGCAGG AGCAGCTTCT
TTTTCTCAGA CAATGACTTT AAAAGTAAAT GGTCCGCAGT CGGAGGTATC TCCAACGATG
TGGGGAATCT TTTTTGAGGA CATTAACTTC TCCGCAGATG GCGGTATCTA CGCCGAATTA
ATAAAGAACC GCTCTTTTGA ATTTACGGAA CCGATGATGG GATGGAAAGA GGTGAAGAAA
GAGGGAGCAG GTAATATATT AATAGTGAAC AGGGAGACCG GGCATACGGC TAATCCCAGG
TATGCACATA TCACCGTAAC TGCGGACAAA GGTAGTTACG GACTGTTCAA TGAGGGTTTC
CGTGGTATGG GCTTTAAAAA AGGGTTATCA TATAACTTTT CTTTTCTGGC ACGCAGCACG
GCAGGTAAAG TAAGCGGAAA ACTGGTATTA GTGGATGATA AGGGTACCCC TATAGGAGCG
GTCGCAGTCT CAGCAGAAGA TAAAGCCTGG AAAAAGTATA CGGCTACAGT GACCGCTGAG
CGTACGGTGG CCAAAGGAGG CGTACAGCTG TTATTTTCCG GTACGGGCGC CCTTGATATG
GATATGGTAT CGTTATTCCC CCAGGATACC TGGAAACAGC GTCCGGGAGG CTTGCGTAAT
GACCTGGTAC AGTTACTGGC CGACCTGCAT CCCGGATTTG TGAGATTTCC GGGCGGTTGT
ATTGTTGAAG GACGGGATCT GGCCAACAGG TATCAGTGGA AAAAAACGGT AGGTAAACCA
GAGGATCGTA CGTTAATCGT AAATCGTTGG AATACGGAAT TTGCGCATCG GGCACCCGGT
GATTATTTCC AGAGCTATGG ACTGGGCTTT TTTGAATATT TCCAGTTATC GGAAGATATA
GGTGCTGAAC CCTTACCGAT TCTCAATTGT GGGATGGCAT GTCAGTTTAA TACAGGAGAG
GTGGCAGCTG ATGAGGATGT GGAAGCGTAT ATACAGGATG CGCTGGACCT GATTGAATTT
GCCAACGGTG CCACGACAAC CGAGTGGGGG CAACTGAGAG CGGAAATGGG GCATCCTGCG
CCGTTTAACC TGAAATTGAT GGGAGTAGGT AATGAGCAGT GGGATAGTCA GTATATTGCC
CGTTATCAGC GTTTTGAGGA GGTGCTGAAG ACTAAACATC CTGAGATAAA ACTGGTATCC
AGTGTAGGGC CATTTTCCAG CGGCGAGCGA TTCGATTATC TGTGGTCTAA ACTGAAGCCT
TCCAAGGCGG ATCTTGTAGA TGAACATTAT TATATGCCAC CGGAGTGGTT TCTGAAAAAT
AGTGCCCGTT ATGATAAATA TGAGCGGAAA GGGCCAAAGA TCTTTGCAGG AGAATATGCC
GCGCATGTTA AAGTACCGCA GGGTAAAAAA GAGACAGATA CTGCAGAAGG AAGGAATACC
TGGGAGAGTG CATTGGCAGA AGCAGCGTTT ATGACGGGAT TGGAAAGAAA TGCGGATCTT
GTACAGATGG CTTCCTATGC GCCATTACTT GCGCATGTGG ATGCATGGCA ATGGAGACCC
GATCTGATCT GGTTTGATAA TCTGCGTTCA GTGGGCACAC CGAATTATTA TGTGCAACGT
CTTTTTGCTA ATAATAAGGG TACGCATACC GTATCTGTTA CATCCGGTAA TCGGGCATTA
ACAGGGCAGG AGGGTATTTA TGCCAGTGCA ACGATTGATA AGCAGGCCCG CAAAATTCTG
CTGAAGGTAG TGAATACCAC AGATAAGGCG GCAGCGTATA CTATTGCGTT GGAAGGCGCT
GTAGCAGCAA CAGGTACAGC TACGCAGGAA GTGCTGACGG CGAAGGCTAA AAGTGATATC
AATACGCTGG ATGCACCATC GGTGGTAATA CCTGTTACTG CACAGATCAA AGCCGGAAAG
AATAAAGTGG CAATTACTGC AGGCGCTAAT TCACTGAATG TAATCACGAT ACCTTATAAA
TAA
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| Protein sequence | MKRIITFVAT AFLLLAGAAS FSQTMTLKVN GPQSEVSPTM WGIFFEDINF SADGGIYAEL
IKNRSFEFTE PMMGWKEVKK EGAGNILIVN RETGHTANPR YAHITVTADK GSYGLFNEGF
RGMGFKKGLS YNFSFLARST AGKVSGKLVL VDDKGTPIGA VAVSAEDKAW KKYTATVTAE
RTVAKGGVQL LFSGTGALDM DMVSLFPQDT WKQRPGGLRN DLVQLLADLH PGFVRFPGGC
IVEGRDLANR YQWKKTVGKP EDRTLIVNRW NTEFAHRAPG DYFQSYGLGF FEYFQLSEDI
GAEPLPILNC GMACQFNTGE VAADEDVEAY IQDALDLIEF ANGATTTEWG QLRAEMGHPA
PFNLKLMGVG NEQWDSQYIA RYQRFEEVLK TKHPEIKLVS SVGPFSSGER FDYLWSKLKP
SKADLVDEHY YMPPEWFLKN SARYDKYERK GPKIFAGEYA AHVKVPQGKK ETDTAEGRNT
WESALAEAAF MTGLERNADL VQMASYAPLL AHVDAWQWRP DLIWFDNLRS VGTPNYYVQR
LFANNKGTHT VSVTSGNRAL TGQEGIYASA TIDKQARKIL LKVVNTTDKA AAYTIALEGA
VAATGTATQE VLTAKAKSDI NTLDAPSVVI PVTAQIKAGK NKVAITAGAN SLNVITIPYK
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