Gene Cpin_4938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4938 
Symbol 
ID8361114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6175505 
End bp6176053 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content47% 
IMG OID644967087 
Productmetal dependent phosphohydrolase 
Protein accessionYP_003124572 
Protein GI256423919 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.318471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAC TTTCCCAGAT CAAAGCCTTC GCCGGACAAG CACACGGCAG CCAACGGCGC 
AAATTTGCCG ACGAACCGTA TATTAACCAT CCCGTAAGGG TGATGGAAAT ATGCGGGAAA
TATACTTCAG ATCTTCCGGT ATTGTCAGCA GCGCTGTTGC ATGACGTACT GGAAGATACT
GCTGTTACCA CAGAAGAGTT ATCAGCATGG CTGTACAAGA CCTTGTCTTC CGCAGACGCT
GACCGTACGC TCAAACTGAC CGTAGAGCTG ACAGATATTT ACGTTAAGAA AGATTATCCG
CACTGGAACA GGCGCAAACG CAAACAAATG GAAGCAACGC GGCTCAGCCA GATCAGTGCA
GCCGGTCAGA CGATCAAGTA TGCTGATATT GTCGACAATG CCAACGACAT TACCACCGCC
GATACTGATT TCATTTCAAC CTTTCTGCAT GAATGTCGTC AACTGCTGAA AGTAATGGAA
AAAGGAAACC CTGCACTACG CCAACAGGCA ATGGATATCG TCAACAAACA TTTGTCTGCA
GTCAAATAA
 
Protein sequence
MDQLSQIKAF AGQAHGSQRR KFADEPYINH PVRVMEICGK YTSDLPVLSA ALLHDVLEDT 
AVTTEELSAW LYKTLSSADA DRTLKLTVEL TDIYVKKDYP HWNRRKRKQM EATRLSQISA
AGQTIKYADI VDNANDITTA DTDFISTFLH ECRQLLKVME KGNPALRQQA MDIVNKHLSA
VK