Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4938 |
Symbol | |
ID | 8361114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6175505 |
End bp | 6176053 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967087 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_003124572 |
Protein GI | 256423919 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.318471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAAC TTTCCCAGAT CAAAGCCTTC GCCGGACAAG CACACGGCAG CCAACGGCGC AAATTTGCCG ACGAACCGTA TATTAACCAT CCCGTAAGGG TGATGGAAAT ATGCGGGAAA TATACTTCAG ATCTTCCGGT ATTGTCAGCA GCGCTGTTGC ATGACGTACT GGAAGATACT GCTGTTACCA CAGAAGAGTT ATCAGCATGG CTGTACAAGA CCTTGTCTTC CGCAGACGCT GACCGTACGC TCAAACTGAC CGTAGAGCTG ACAGATATTT ACGTTAAGAA AGATTATCCG CACTGGAACA GGCGCAAACG CAAACAAATG GAAGCAACGC GGCTCAGCCA GATCAGTGCA GCCGGTCAGA CGATCAAGTA TGCTGATATT GTCGACAATG CCAACGACAT TACCACCGCC GATACTGATT TCATTTCAAC CTTTCTGCAT GAATGTCGTC AACTGCTGAA AGTAATGGAA AAAGGAAACC CTGCACTACG CCAACAGGCA ATGGATATCG TCAACAAACA TTTGTCTGCA GTCAAATAA
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Protein sequence | MDQLSQIKAF AGQAHGSQRR KFADEPYINH PVRVMEICGK YTSDLPVLSA ALLHDVLEDT AVTTEELSAW LYKTLSSADA DRTLKLTVEL TDIYVKKDYP HWNRRKRKQM EATRLSQISA AGQTIKYADI VDNANDITTA DTDFISTFLH ECRQLLKVME KGNPALRQQA MDIVNKHLSA VK
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